Arthrobacter sp. U41: ASPU41_18835
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Entry
ASPU41_18835 CDS
T05053
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
aru
Arthrobacter sp. U41
Pathway
aru03030
DNA replication
aru03430
Mismatch repair
aru03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ASPU41_18835
03430 Mismatch repair
ASPU41_18835
03440 Homologous recombination
ASPU41_18835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aru03032
]
ASPU41_18835
03400 DNA repair and recombination proteins [BR:
aru03400
]
ASPU41_18835
Enzymes [BR:
aru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ASPU41_18835
DNA replication proteins [BR:
aru03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ASPU41_18835
DNA repair and recombination proteins [BR:
aru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ASPU41_18835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Motif
Other DBs
NCBI-ProteinID:
AOT05065
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All DBs
Position
complement(4133419..4134438)
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AA seq
339 aa
AA seq
DB search
MGLDFTAIDFETANGFRGSPCAVGLSKVRGGVVVEEASWLMRPPENHDRFDHHNVRIHGI
RPEQVAGLPRFGELFPEIGAFIGGDVLAAHNAAFDLGVIRSGLEVSGLPGPAYDFVCTVM
LSRRCYSLVSNSLPYAAGEAGVPLVNHHDAAEDARACAGILIDIAARNGAGSIAELYLSL
GLTVSRQAAFDPLRDPLSKASQSALDALAGGGPAVSAVRAYQPGWPEEGANPPPNALAEP
GHPLFGQTVVFTGELAIPRPEAKVRSAEFGARPESRVTARTTVLVVGDGFVAADLRSGRL
TGKARRVLELHDRGQRIEVLSEGEFLQMVGGHVASAALA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgggtttggactttacggcgatcgactttgagaccgcgaatggcttccgcggttcaccg
tgcgctgttggcctgagcaaggtgcgtggcggcgtcgtggtcgaggaggcgtcctggctg
atgcggccgccggaaaaccacgaccgcttcgaccaccacaacgtccggatccacggaatc
cggcctgagcaggtggccgggctgccccgcttcggtgaattgttcccggagatcggcgcc
ttcatcggcggcgacgtcctggccgcgcacaatgccgccttcgacctcggtgtgatccgc
tcgggacttgaggtctccggcctcccgggcccggcctatgacttcgtctgcacggtcatg
ctctcccgccgctgctactccctggtctccaactccctgccctacgcggccggggaggcc
ggtgtcccgctggtcaaccaccacgacgccgccgaggacgcgcgggcctgcgccgggatc
ctgattgacattgccgcgcgcaacggcgccggcagcatcgcggagctctacctgtccctg
ggcctgacggtctcccgccaggccgccttcgacccgctgcgcgatccgctttccaaagcc
agccagtcggccctggacgcactcgccgggggagggcctgccgtgagcgcggtccgcgcc
taccagcccggctggccggaggagggcgccaatccgccgccgaacgccctcgccgagccc
gggcaccccctgttcgggcagaccgtggtgttcaccggcgagctggccatcccccggccc
gaggcgaaggtccgttccgccgagttcggcgcccggcccgagagccgggtcacggcccgc
accaccgtcctggtggtgggcgacgggttcgtggccgccgacctgcgctccggccgcctc
accggcaaggcccggcgcgtgctggagctgcacgaccgcggccagcggatcgaggtcctt
tccgaaggcgaattcctgcagatggtgggcgggcacgtcgcctccgccgcgctggcctga
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