Arthrobacter sp. U41: ASPU41_19720
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Entry
ASPU41_19720 CDS
T05053
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aru
Arthrobacter sp. U41
Pathway
aru03420
Nucleotide excision repair
aru03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ASPU41_19720
03430 Mismatch repair
ASPU41_19720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aru03400
]
ASPU41_19720
Enzymes [BR:
aru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ASPU41_19720
DNA repair and recombination proteins [BR:
aru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ASPU41_19720
MMR (mismatch excision repair)
Other MMR factors
ASPU41_19720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AOT05208
UniProt:
A0A1C9WW10
LinkDB
All DBs
Position
complement(4341531..4345028)
Genome browser
AA seq
1165 aa
AA seq
DB search
MSAETTSPASLPAALPAARFTPEELSAMLGEKNSPTAEQSHIISSPLSPRLVIAGAGSGK
TATMADRVVWLVANGWVRPEEVLGVTFTRKAAGELATRIRAKLGALQRIAAADTQNQVFP
AGLLSTDALEPKVSTYHSYASAIVSDYGLRLGVERDVVLLGGAQSFQLASEVVEAFDGEY
EHFRSAKSTLVKAVIQLAGECAEHLQDPAGVRGWLLDRVAEFEALPYLATAKKNPSQAVG
ELSGLLRTRASVAEMVGRYADGKRARGALDFGDLVALAAGVANEIPVAAETERQRYKVVL
LDEFQDTSHAQLVLFSRLFGGGHAVTAVGDPNQSIYGFRGASAGQLFHFVREFPVRLAAE
DGAAAAERFAVAPTSYLTTAWRNGRNILSAANVISAPLSKAAAHTGPAGERDTAGGVEVP
PLQPSPAAVQGRVVMGRFGTDEDEAAAIAGDVLKFRVTDFDGSAAEPEPPAMAVLCRRRA
QMEVIRREFEVRGIPYEIVGLGGLLDTPEIVDLVATLRVLADPGRSDSLMRLLCGARWRI
GPADLMALRDWSSFLARRRGRPGTTDDDAADDVADAAVIEGDLTDAASLVEAIDWLPREG
WTSAHGRQLSPEGLQRLHRLSAELRQLRGFMGDDLTTLLGEVERAMLLDIEVAARPGVSI
HQARRNLDAFQDAAAGFLHTSQRVDVLAFLAWLEAAAAEENGLDAAAPEVNHEAVQLLTV
HASKGLEWDVVFVPGLNAGAFPSSRDSRWSSGSAALPWPLRGDRADLPQWDLEHPDQKGW
LDAEKEFKSAVQVHGEAEERRLAYVAYTRAKHVLWVSSAAWVGARAGMAAMSPFLAELEV
LAEDAAAAIHPLSVSEDALPEASPLTSELEVAGWPYDPLEGPRDPRTGARLRLVPGRRAA
MQSAAERVLQSLGSGVLQDAGGPGAAAAGGATGTARRQLRGPAGGWAHEAATLLERRSRR
SAVQEVHLPGHISASTLVDLEEDAGSVVARLRRPVPREPGMSARKGTAFHAWVEEYFGTA
GMLDLGEAAGSDDHIDAAYGLDTMVETFRRSEWANRAPAHVEVPVETRIGDVVVRGRIDA
VFRDADGGWDLVDWKTGRRPSAGQLKTKAVQLAVYRLAWARLKDIPVEQVRAAFYYVADN
QVVRPHDLGSAERLEQIVAAALGTS
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgaaacaacttctcccgcctccctgcccgccgctctccccgccgcccggttc
acccctgaagagctctccgcgatgctgggggagaagaacagccccacagccgaacagtcg
cacatcatttcctcgcccctgtctccccggcttgtgattgccggcgccggctcgggcaag
accgccaccatggccgaccgcgtggtgtggctcgtcgccaacggctgggtccggccggag
gaagtgctcggcgtgacgttcacgcggaaggccgccggggagctggccacccgcatccgc
gccaagctgggcgcgctgcagcgcatcgccgcggccgacacgcagaaccaggtgttcccg
gccggactgctcagcaccgacgcgctcgaacccaaggtctccacctaccactcctacgcc
agcgccatcgtgtccgactacggtctccggctcggcgtcgaacgcgacgtcgtgctgctc
ggcggcgcccagtccttccagctggcgagcgaggtcgtggaagccttcgacggcgagtac
gagcactttcgctccgccaagtccaccctggtcaaggccgtcatccagctcgccggcgag
tgcgctgaacacctccaggacccggccggagtccgcggctggctgctggaccgggtggcc
gagttcgaggcgctgccctacctcgccaccgccaaaaagaaccccagccaggcggtgggc
gagctcagcggcctgctccgcacccgggccagcgtcgcggaaatggtgggacgctacgcg
gacggcaagcgcgcccgcggcgccctcgacttcggcgaccttgtggccctcgccgccggc
gtcgccaacgagatcccggtcgccgcggaaaccgaacgccagcgctacaaggtggtgctg
ctggacgaattccaggacacctcgcacgcccagctggtcctcttctcccgcctgttcggc
ggcggccacgcggtcaccgcggtgggggaccccaaccagtccatctacggcttccgcggc
gcctccgccggccagctcttccacttcgtccgcgaattcccggtgcggctcgcggccgag
gatggcgctgccgccgctgagcgctttgccgtggctccgacctcgtacctcaccacggcg
tggcgtaacggccggaacatcctctccgccgccaacgtcatttcagcacccctcagcaaa
gccgcagcccacaccggccccgccggcgaacgggacaccgccggaggcgtcgaggttccg
ccgctgcagcccagcccggccgcggtccagggccgcgtggtgatgggccgctttggcacc
gatgaggacgaggccgccgcgatcgccggcgacgttctgaagttccgggtgaccgacttt
gacgggtcggcggcggagcctgagcctcccgccatggcggtgctgtgccgccggcgtgcc
cagatggaagtcatccgccgcgaattcgaggtgcgcgggatcccctacgaaatcgtcggc
ctcggcggtctcctggacactcccgagatcgtcgacctggtggcgacccttcgggtcctg
gccgatccgggccgctcggattcgctgatgcgcctgctctgcggggcgcgctggcggatc
gggcccgcggacctgatggccctgcgggactggtccagtttcctcgcccggcgccgtggc
cgccccggcacaacggacgacgatgccgccgacgacgtcgcggatgctgcggtgatcgag
ggcgacctcacggacgccgccagcctggtcgaagccatcgactggctgccgcgcgaaggc
tggacctccgcgcacggacgccagctcagccccgaggggctgcagcggctccaccggctc
tcggcggaactccggcaactgcgcggcttcatgggcgacgacctcaccaccctgctcggc
gaggtggagcgggccatgcttctcgatatcgaagtcgccgcacggcccggggtcagcatc
caccaggcccgccgcaacctggacgccttccaggacgccgccgccgggttcctgcacact
tcccaacgggtggacgttctcgccttcctggcctggctcgaggccgcggctgccgaggag
aacggcctggacgccgccgcacccgaagtgaaccatgaagcggtgcagctgctgaccgtg
cacgcctccaaaggcctggagtgggatgttgtgtttgtgcccgggctcaacgccggagcc
ttccccagcagccgggactcccgctggagcagcggcagcgccgcactgccgtggccgctg
cgcggggaccgcgcggacctgccgcaatgggacctcgaacaccctgaccaaaaaggctgg
ctcgacgccgagaaggagttcaagtccgccgtccaggtccacggcgaggccgaagagcgg
cggctggcgtatgtggcttacacccgggcgaaacacgtgttgtgggtttccagcgccgcc
tgggtgggcgcacgcgccggtatggctgccatgtcgcctttcctggccgaactggaggtg
ctcgctgaggacgccgccgccgcgatccaccctttgtcggtgagtgaggacgcgctgccg
gaggcgagcccgctgacctcggaacttgaggtcgccgggtggccgtacgacccgctggag
gggccacgcgacccgcgcaccggagcccggctgcggctggtgccggggcggcgggcggcc
atgcagtctgccgcggaacgggtgctgcagtccttgggctccggcgtgctgcaggatgcg
ggcgggccgggcgccgccgctgctgggggcgccaccggcacggcaagacgccagttgcgc
ggcccggccggcggctgggcgcacgaggccgcgaccctgctggaacgccgctcccgccgg
agtgcggtgcaggaggtgcacctgccgggccacatctccgcgtcaaccctggtggatctg
gaggaggacgccggctccgtcgtcgcccggctgcggcggcccgtcccgcgggaaccgggg
atgtccgcccgtaaaggcaccgctttccacgcctgggtggaggagtacttcggtaccgcg
ggcatgctggacctcggcgaggcggcgggctccgatgaccacatcgacgcggcctacggc
ctcgacaccatggtggaaaccttccgccggtcggaatgggccaaccgcgccccggcccat
gttgaggtaccggtggagacccggattggcgacgttgtggtccggggccggatcgacgct
gtcttccgcgacgccgacggcggctgggacctggtggactggaagaccggccgccggccc
tccgccggccagctgaagaccaaggccgtccagctggccgtctaccggctggcctgggcc
cggctcaaggacatcccggtggagcaggtccgggctgcgttctactacgtggcggacaac
caggtggtccggccgcatgacctgggctcggcggaacggctcgagcagattgtcgccgcg
gccctggggacgagttag
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