Arachnia rubra: J5A65_05275
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Entry
J5A65_05275 CDS
T07339
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
arub
Arachnia rubra
Brite
KEGG Orthology (KO) [BR:
arub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
arub03016
]
J5A65_05275 (thpR)
Enzymes [BR:
arub01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
J5A65_05275 (thpR)
Transfer RNA biogenesis [BR:
arub03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
J5A65_05275 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
QUC09134
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All DBs
Position
1162919..1163479
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AA seq
186 aa
AA seq
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MMRCFLAVIPPADVIAGIERFLEPRRTASQRSPWRWTRPGSYHVTLAFMADYPDQRTEEL
IQGLDAWAQRRAPLTMTVAGAGAFRSPERAKVLYLGVPGEAAARLGEWSQQLRALVTHHG
GSPDGAGFTPHLTVARAGRAQQAGRLVQALDTYVSAAFTVSEVALVESHLGERRHEVLYC
ASLSGV
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgctgtttcctcgctgtgatcccgcctgccgatgtgatcgccggtatcgagcgc
ttcctggagccgcgccggactgcctcccagaggtcgccgtggcgctggacccggcccggc
agctaccacgtcaccctggcgttcatggccgactacccggaccagcgcaccgaggagctc
atccagggcctcgacgcgtgggcccagcgccgcgcaccactgaccatgacggttgccgga
gccggggccttccgcagccccgagcgcgccaaggtcctctacctcggcgtgccgggtgag
gccgcggcgaggctgggggagtggtcgcagcagctgcgggcactcgtgacccaccacggc
ggcagccccgacggggcgggcttcacaccccacctgaccgtggcccgggccggccgtgcc
cagcaggccggccgcctcgtccaggccctcgacacctacgtctcagcggcgttcaccgtc
tccgaggtggccctcgtggagtcgcacttgggggagcgtcgtcacgaggtgctgtactgc
gcatcgctgtccggggtctga
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