Arachnia rubra: J5A65_05875
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Entry
J5A65_05875 CDS
T07339
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
arub
Arachnia rubra
Brite
KEGG Orthology (KO) [BR:
arub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arub03019
]
J5A65_05875
Enzymes [BR:
arub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
J5A65_05875
Messenger RNA biogenesis [BR:
arub03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
J5A65_05875
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
SH3_HelY
ResIII
DEXQc_Suv3
Helicase_C
Phage_GPD
Motif
Other DBs
NCBI-ProteinID:
QUC09242
UniProt:
A0ABX7Y859
LinkDB
All DBs
Position
1283811..1286555
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AA seq
914 aa
AA seq
DB search
MTDQVQRFAALYSFPLDDYQLAGCEALASGAGVLVAAPTGAGKTVVGEFAAWLALETGSR
CFYTTPIKALSNQKYHDLVARHGVAQVGLLTGDSSVNGDAPVVVMTTEVLRNMIYAGSTG
LNNLGHVVMDEVHYLADRFRGAVWEEVILGLAPQVQVTALSATVSNVEDFGDWLRTVRGS
FEIVVSERRPVPLYQQVLVGKRLIDLFEGIAPTARELPGSRAAKVNRELVKVSRAEATRV
RDDSRRPRGRSGRGKRPRGTGSFGGDVHPRFAGQRTSRAETARVLERARLLPAICFIFSR
AGCDAAVSQLLAAGVTLTSRDEAALLGEIADRHVAGLSMADLDALGYEDFRAALCSGVAA
HHAGQLPAFKAIVEEGFATGACKLVFATETLALGINMPARTVMLEKLVKYNGEAVVDITP
GEYTQLTGRAGRRGIDVEGYAVVLWQPGMDPRAVAGLASRRTYPLRSSFSPSYNMAVNLT
AAMGRERAREVLNQSFAQFTIDKSVVTASRAGRDRGREIAASRAEAECHLGDFMEYAALR
EEISQLEGISAAARRARRADDTAEAISKLMPGDVIWVPRQGWCVVLAVGQKQSRDGVPWA
QIIAADHTILRLRPHDLPGAPAPVARVRVPRRFSAQDRKARRELLASLSAKLESVDPETP
TFDPTPTDEAQAARIAELRREMKRHPCHACEERELHAVAAARAIRLEREAARLEAELTGR
ANSLAVQFDRVCGVLSDLGYLHGDELTGAGRMLRRIYNELDLVAAECIRRDVFADLDAPQ
LAAVLSSLLYESRPSRDQRPPRMPDAASEAAQSALRTVWREVGALERNHRRDRGREPDIG
FAEAAWRWASGQELAKVLRISGLSAGDFVRWVRQVVDLAGQIATAAGLGDLRRTCREAVF
AMRRGVVDTDLEED
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatcaggtgcagcgcttcgccgcgctctactcctttccgcttgacgactatcag
cttgctgggtgtgaggctctcgcgtcgggggctggggtgctggtggctgccccgaccggg
gccggtaagaccgtggtcggtgagttcgccgcgtggctggccctggagacggggtccaga
tgcttctacaccacccccatcaaggctctcagcaatcagaaataccacgatctcgtagcc
cggcatggtgtcgcacaggtgggcctgctgactggggactcctcagtcaacggcgacgcg
ccggtggtggtgatgaccaccgaagtgctccgcaacatgatctatgcgggttccacggga
ctgaacaacctggggcatgtcgtcatggacgaggtgcactatctggccgaccggttccgg
ggagcggtgtgggaggaggtcatcctggggttggctccccaggtccaggtcacggcgctg
tccgcgactgtcagcaacgtggaggacttcggcgactggctgcgcaccgtgcgcggcagt
ttcgagatcgtggtctccgagagacgcccggtgccgctctaccagcaggtgctggtggga
aagagactcatcgacctgtttgaggggatcgccccgaccgccagggaacttccaggcagt
cgcgcggcgaaggtgaatcgtgaactggtgaaggtctcccgcgccgaggccacgcgcgta
cgtgatgactcacgccggccccggggacgctctggccgcgggaaacggccgcgcggtaca
gggtccttcggcggcgatgtgcacccgcgtttcgcggggcagcgaacctcgcgggctgag
acggctcgtgtgctggagagggcccggctgcttcccgcgatctgcttcatcttcagccgg
gccggctgcgacgccgccgtcagtcaactgctcgcagccggggtcaccctcaccagccgg
gatgaggcggccctgctgggggagatcgccgaccggcacgttgccggactgtcgatggcc
gatctggatgccctgggatacgaggacttccgcgcagccctctgctctggggtggccgcc
caccacgccgggcagctgcctgccttcaaggcgatcgtcgaagaaggtttcgccacgggg
gcctgcaagctggtgttcgcgaccgagaccctggcgctcggcatcaacatgccagctcgc
acagtgatgctggagaaactggtcaaatacaacggtgaggccgtggtggacatcacgccg
ggtgagtacacgcagctgaccgggcgggccggtaggcggggcattgacgtcgagggatat
gccgtcgtgctctggcagcccgggatggatcccagggcggtggcgggcctggcctccagg
cgcacctatccgctgcgttcctcgtttagcccgagctacaacatggccgtgaacctgacg
gcggcgatgggcagggaacgagcgcgtgaggtgctgaaccagtcgtttgcgcagttcacc
atcgacaagagcgtggtcaccgccagtcgcgctggtcgtgaccgggggcgggagatcgct
gccagccgtgctgaggccgagtgtcacctgggggatttcatggaatacgcagcgctgcgt
gaggagatctcccagctggagggcatctccgctgcggcacgccgcgcccggcgggcagat
gacactgccgaggccatctcgaaacttatgccaggcgatgtgatctgggtgccgagacag
ggctggtgcgtagtgctggccgtcggtcagaagcagagccgcgacggtgtgccctgggcg
cagatcatcgccgctgaccacaccatcttgagactgcggccccacgacctgcccggggcg
cccgcgcccgtggcccgggttcgcgtcccacggcggttctcggcgcaggatcgcaaggcc
cgccgggagctcctggcgtccctgtccgccaagctggaatccgtcgatcccgagacccct
accttcgacccgaccccgaccgatgaggcgcaggccgcccgcatcgcagagctgagacgc
gagatgaaacggcacccctgtcatgcctgcgaggaacgggaactgcacgccgtcgccgcg
gcacgcgccatccggctggagcgggaggcagcacgcctggaggcagagttgacgggacga
gccaactccctggcggtgcagttcgaccgggtgtgcggggtgctctccgacctcggctac
ctgcacggtgacgagctaaccggcgcgggccggatgctgcgccgcatctacaacgagctg
gacctcgtcgccgccgagtgcatccggcgtgacgtgttcgctgacctggacgcaccgcaa
ctggccgcggttctgtcctcgctgctttacgagtcacgacccagccgggatcagcggccc
ccgcgcatgccggatgccgccagtgaggccgcccagtccgcgctgcgtaccgtgtggcgt
gaggtcggggcgctggaacgcaaccaccgccgcgaccgggggcgcgaaccggatatcggc
ttcgctgaggcggcctggcgctgggccagcggccaggagctcgcaaaggtattgcgcatc
agtggcctgtccgccggtgacttcgtgcgctgggtgcggcaggtcgtggatctggcagga
cagatcgccaccgcggcgggcctgggggatctgcgccgcacctgccgggaggcggtcttc
gctatgcggcggggcgttgtcgacaccgaccttgaggaggactga
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