Arachnia rubra: J5A65_05985
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Entry
J5A65_05985 CDS
T07339
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
arub
Arachnia rubra
Pathway
arub03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
arub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
J5A65_05985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arub03400
]
J5A65_05985
Enzymes [BR:
arub01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
J5A65_05985
DNA repair and recombination proteins [BR:
arub03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J5A65_05985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
PDDEXK_1
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QUC09263
LinkDB
All DBs
Position
complement(1311971..1315135)
Genome browser
AA seq
1054 aa
AA seq
DB search
MIPFDITGPLPDGPMLLEASAGTGKTWTIAGLAVRHIAEAGVPIGQLLLITFSNAAAQEL
RGRVHSRIVSVAADLSSMLAGEATPADPVSQLLGTDRHARRYLQRLHAALDDFGTAAITT
IHSFCQGQLESLGMLGDWDSADQVVADVSTLVRECATDEYLASYLNQPAPPLDARRALLV
AATAAPSRLPLASPDQELLDFQARVRERFTRRRRELGLVSFDDLPGRLRELVGSSAAAEQ
VRTELRRRFPVVLVDEFQDTDPDQWDILRRTFVDADAMITLIGDPKQSIYGFRNADLGSY
LEAAKVVRHRATLETNHRSEPGVVAGVAELFGNVSLGSGGIQVTPVRSIRSPEDGVLVLT
DAPTARIWLRGHGPGATDNPDRAVAGDVVAHVRSLLAGARIRGKDGERRIGPQDIAVLTR
TRDRGLALTADLHAAGLPATWHGPGSALDSPAVADWLAVLAAVAQPTRARILQAALGNLL
GLPATDLLTERTETEASQRVHELARCFAAGGVVSLTSELLVGAAPHLAHLSDGERRLADL
TQVGELLASSGATSLDSLQAWLSTQAARPAGELTTRLASDQAAVRVCTMHSAKGLEFPIV
LLPQVSVTEVNLRGAFPYVDAAHRRVLHVGARPGYRDELALVARQQARAEELRLLYVGLT
RARHLAIAWHVMDRRALGGPLTALLCRDRSVPQLNPDYARLPSAFGFDPELVHLSPVTAT
PWGSDLPVPEPEAPPGSLHTARFTRDIDQQWRRTSYSGLTAGLHEQALDEPEELDLALEA
DTGPVTASPMNDLPAGARFGTLVHEVLEQADWNHLEHLSQVTESRAPLFGLDTEQAQQLA
EALKLVVTTPLGGLCEEALADLPVRDRLAELDFDLPLGDRGRASLVADLAHALSQHLPAS
DPLAAYPERLVRTEAAQATLKGFLTGSIDAVLKLPTGRFTVVDYKTNRLPTPPGQDLAAE
HYSPPAMAEAMMQAHYPLQALLYCAALHRFLAWRLPGYCPEQHLGGVGYLFVRGMAGPRT
PVVGGGRCGVFEWFPPATLVVEVSELLGGCHDET
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgatccccttcgatatcaccggtcccctgcccgatgggccgatgctactggaggccagc
gccgggacgggtaagacctggaccatcgccgggcttgcggtccgtcacattgccgaggcg
ggagtgcccataggccagctgctgctgatcaccttcagcaatgccgccgcccaggagttg
cggggacgcgtccactcccggatcgtctcggtcgccgccgacctatcgtcgatgctggcg
ggggaagccaccccggcggacccggtctcgcaactcctgggcacagaccgccacgccagg
cgctacctgcagcggctacacgcagccctggatgatttcggcaccgcagccatcaccacc
atccactcgttctgccaggggcagctggagagcctgggcatgctgggtgactgggacagc
gccgaccaggtggtggccgatgtctccacgctggtgcgggaatgcgccaccgacgagtac
ctggccagttacctcaaccagcctgctcccccgctggatgcacggcgcgcgctcctggtc
gccgccacagcggccccatcgcgccttcctttggcctcgccggaccaggagctgctggat
tttcaggcacgggtgcgggaacgcttcacgcgacgacggcgtgagctagggctggtcagc
ttcgacgatctgcccggcaggctgagagagctggtgggcagctccgcggccgccgagcag
gtgcgtacggagctgcgccgccgcttccccgtcgtgctggtggacgagttccaggacacc
gacccggaccagtgggacatcctgagacgcaccttcgtggatgcggatgcgatgatcacc
ctgatcggcgaccccaagcagtcgatctacggcttccgcaacgccgatctcggctcctac
ctggaggcagcgaaagtggtgcggcaccgcgcgaccctggagaccaaccaccgcagcgag
cccggggtggtggccggggtggcggagctgtttggcaacgtttccctgggcagcggcggc
atccaggtcacccctgtgcgttccatccggagcccggaggatggggtgcttgtcctcacc
gacgcccccacggcccgcatctggctacgcggccacggccccggagccactgacaacccg
gatcgtgccgtcgccggggacgtggtggctcacgtgcggtcgctgctggccggagcacgc
atccgcggcaaggacggggaacgcaggatcggcccgcaggacatcgcggtcctcacccgc
acccgtgaccgcggcctggcgctgacagctgatctgcacgccgctgggctgcccgccacc
tggcatggtcctggctctgccctcgactcgcctgcggtcgccgactggctggcagtgctc
gccgcggtcgcacagccgacccgtgcccgtatccttcaagcggctctggggaatctgctc
gggctgcctgccaccgacctgttgactgaacgcactgagaccgaggcatcgcagcgcgta
cacgagctggccaggtgtttcgcggcaggcggcgtggtgtcactgaccagcgagctactg
gtcggcgctgcccctcacctggcgcatctcagcgatggggaacgccgcctggccgacctc
acccaggtcggcgaactgttggcgtcctcgggggccaccagcctcgacagcctccaggcc
tggttgagcacgcaggcagcgaggccggcgggtgagctgaccacccggctggcgtcggac
caggcagcggtccgggtatgcaccatgcactcggccaaggggctggagttcccaatagtg
ctcctgccgcaggtcagtgtcacagaggtgaacctgcgtggtgcttttccgtatgtggac
gccgcgcaccgccgggtgctgcacgtgggtgctcgtcccgggtaccgggacgagctggcc
ctggtcgccaggcagcaggcgcgtgccgaggagctgcggctgctctacgtggggctcacc
cgtgccaggcacttggctatcgcgtggcatgtgatggaccggcgtgccttaggaggtcct
ctgacggcgctgctgtgccgtgaccgctcggtcccacagctcaaccccgactacgcccgg
ctgccatctgctttcggtttcgacccggagctggtgcacctgtcaccggtcaccgccacc
ccctggggcagcgatcttccagtcccggagcccgaggccccgcccggaagccttcacacc
gcccgtttcacccgtgacatcgaccagcagtggcggcgcacctcgtattccggactcacc
gcgggcctccacgagcaggccctggatgagcctgaggagctggatctggcactggaagcg
gacacgggacctgtcaccgcctcacccatgaacgatctgcccgcaggcgcccgcttcggg
acactcgtgcatgaggtcttggagcaggcggattggaaccatctagagcatctgtcccag
gtgaccgagtcgagggctccgctgttcgggctggacacagagcaggcgcagcagcttgct
gaggcgctgaaactggtggtgaccactcccctgggcggactctgcgaggaggccctggcg
gacctgccggtcagggaccggctggcggaactggacttcgacctgccactgggagatcgt
ggcagggcatcgctcgtcgcggatttggcgcatgcgctgtcccagcacctgcccgcctcc
gacccgctggccgcctatccggagcggcttgtccgtaccgaagccgcccaggcgacgttg
aagggcttcctgaccggttccatcgacgcggtgctgaaactgccgacgggaaggttcacg
gtggtggactacaagaccaaccggcttcccacccctcccggccaggacctggccgccgaa
cactactcgcctcccgccatggcggaggcgatgatgcaggcccactacccgctccaggcg
ctgctgtactgcgcggccctgcaccgtttcttggcctggcggctgcccggctactgcccc
gagcagcatctgggtggggtgggttacctgttcgtgcggggcatggctgggcctcgcaca
ccggtcgtggggggcgggcgctgcggcgtcttcgagtggttccccccggccacgctcgtg
gtggaggtctctgagctgctgggaggatgtcatgacgagacctga
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