Arachnia rubra: J5A65_06330
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Entry
J5A65_06330 CDS
T07339
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
arub
Arachnia rubra
Pathway
arub03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
arub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J5A65_06330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arub03400
]
J5A65_06330
Enzymes [BR:
arub01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
J5A65_06330
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
J5A65_06330
DNA repair and recombination proteins [BR:
arub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
J5A65_06330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
QUC09327
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All DBs
Position
1405419..1406243
Genome browser
AA seq
274 aa
AA seq
DB search
MPEGHVIHRLASIFQADFAGHGVSVSSPQGRFAEEAARLDGSTLTGAEAVGKHLFIDFDV
PDPHRIHIHLGLIGKLGFTPVTDPVGQVRLRIVSGGQAADLRGPQWCRLVTDEQYEKVFA
DSGPDPLRTDADPSRGLARIQRSGKSIAALLMDQRVAAGVGNIFRAEVLFRHGIDPMTPG
RDIDEATWRMLWDDLVGLMAVALERGRIDTVAPEHGPEAQDRPPRVDAHGGEVYVYRRAG
QPCLVCGTQVSTMMLEGRNLYWCSRCQQSHAASD
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaggacacgtcatccaccgtctcgccagcatcttccaggcggacttcgccgga
cacggcgtcagcgtcagctctccgcagggaaggttcgccgaagaggcggcccggctggac
ggctccaccctcactggtgccgaggccgtcggaaaacacctcttcatagatttcgacgtc
ccggacccgcaccgcatccacattcacctgggactgatcgggaagcttggcttcacgccg
gtgaccgaccccgttgggcaggtgcggctgcggatcgtatccggcgggcaggcagccgac
ctgcgggggccgcagtggtgccgcctggttacggacgagcagtacgagaaggtgttcgcg
gactcaggtcccgacccgctgcgcaccgacgccgatccctcccgtggcctggcgaggatc
cagcggtcggggaagtccatcgccgccctgctgatggatcagcgggtcgctgcgggggtg
ggcaacatcttccgcgccgaggtgctgttccggcatggaatcgatccgatgacaccggga
cgggacatcgacgaggccacctggcgtatgctgtgggatgacctggtgggcctgatggcc
gtcgccctcgaacgcggccgcatcgacaccgtcgccccagagcatggtcccgaggcccag
gacaggcccccgagagtggacgcccacggcggcgaggtctacgtgtaccggcgtgccgga
cagccatgcctggtgtgtggcacgcaggtaagcaccatgatgctggagggacgcaacctc
tactggtgctcaaggtgccagcaatcacacgctgcttccgactag
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