Arachnia rubra: J5A65_07705
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Entry
J5A65_07705 CDS
T07339
Name
(GenBank) HRDC domain-containing protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
arub
Arachnia rubra
Brite
KEGG Orthology (KO) [BR:
arub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
arub03016
]
J5A65_07705
Enzymes [BR:
arub01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
J5A65_07705
Transfer RNA biogenesis [BR:
arub03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
J5A65_07705
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QUC06868
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All DBs
Position
1693217..1694434
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AA seq
405 aa
AA seq
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MSDFVEQSREPLRPVVETSGHFDECLSALSTATGPVAFDAERAHGHRYWPKAYLFQIRRQ
GAGTWLIDPIALEQAPARLSDLVSACSDAPWVIHAASQDLPCMTEVGVRPPYLFDTELSA
RLLGEPSVGLAALLEAKLGIRLRKAHSAANWATRPLPTSWLIYAALDVDYLLELADVLNT
ELTASGRLSWAREEFAYTLDLFTTPSAPRKEPWRRLSGLQGLRHPVQLAVARALWQEREA
IAQQKDRPPSRILPDAAIVGIASKADKESPLPDAPTLAGVPGFRSRNAGRYRAHWSRALE
SVSRMSPDDYPQRRPEATGIPQPRSWERSHPDRWVFWKKARAAVDALAGELGIQPSLVIS
SATLSTCIYEWEEGQDFREALAGLGVRDWQVEFLVPLLNKCLQDG
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatttcgtcgagcagtcacgagaacccctacggcctgtggtggagacctctggg
catttcgacgagtgtctctccgctctctccacagcaaccggtcccgtcgcattcgacgcg
gaacgtgcccacgggcaccggtactggccgaaagcttatctgttccagatccgcaggcaa
ggcgccgggacctggctgattgatcccattgccctggagcaggctccagcgaggctcagc
gatctcgtcagcgcctgctcggacgccccatgggtcattcacgcggcctcacaggacctg
ccgtgcatgaccgaagtgggtgtgcggccgccgtatctcttcgacaccgaactgtctgcc
cggctacttggagagccatcggtcggactcgctgccctgctggaggccaaactcggtatc
cggttgcgcaaagctcattcggcagctaactgggccacccgcccgctgcctacttcctgg
ctgatctacgcggccttggatgtcgactacctgcttgaactggctgatgtcctgaacacg
gagctgaccgccagcgggcgtctttcctgggcccgggaggaattcgcatacacgctggac
ctgttcaccaccccctctgctccccggaaggagccgtggcgacgcctttcagggctgcag
gggttgagacatccggtacagcttgccgtagcccgggcgctctggcaggaacgagaggct
atcgcccagcagaaggaccgtcccccctcccggatactacctgacgccgcgatagtgggt
attgcatcgaaagcagacaaggagagtcctctaccagacgcaccgacgttggccggcgtt
cctggattccgctccaggaacgccggaagataccgggcgcactggagtcgggccctggag
tcagtctctaggatgtccccggatgattacccgcagcgccgcccggaggcgactgggata
ccgcagccacgttcctgggaacgtagccatccggatcgctgggtcttctggaagaaggcc
cgcgccgctgtggacgcattggctggcgaacttggcatccagccgagcctcgtgatctcc
tccgccactttgtccacctgtatctacgaatgggaggaaggacaggacttccgggaggct
ctcgccgggttaggggtgcgggactggcaggtggagttcctggtgccgctgttgaacaag
tgccttcaagacggctga
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