Arachnia rubra: J5A65_08570
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Entry
J5A65_08570 CDS
T07339
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
arub
Arachnia rubra
Pathway
arub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J5A65_08570 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arub03019
]
J5A65_08570 (rny)
Messenger RNA biogenesis [BR:
arub03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
J5A65_08570 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_KhpA-B
KH_PNO1_2nd
KH_NusA_2nd
KH-I_KHDC4-BBP
UPF0242
Motif
Other DBs
NCBI-ProteinID:
QUC07019
UniProt:
A0ABX7Y1L8
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Position
complement(1880628..1882235)
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AA seq
535 aa
AA seq
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MEWLGWVIAGLLGIVLTVLTWRQRRAALSFIQEKARIERRSRSDAASIRKQAMEAAEQLR
TDAERALEQAQERSREAAADIDRRRDDLEAAIAAQRAELREQRSAQERHEERLHEREDRL
AAEAEGLATRAELLEQQRVELRRKREEIAGEQERARIELERVAGLTVSAAHSEVMAEAER
QARLAAATLARDIEESARAEADRRARSIVVTAIQRCAAEQTSESVVSSVDLPGDDMKGRI
IGREGRNIRAFEQITGVNVMVDDTPETVLLSCFDPVRREAARLTLTDLVADGRIHPARIE
EVHARSLRLLDERIKTVGSEALLEVGIADLHPDLLPIIGSLAYRTSFGQNVLAHLIECAH
LAGVMAAELGLDVAQCKRAAFLHDIGKALTHESEGPHAIVGADLLRRHGENPDIVHAVEA
HHNEVEPHTVEAVLTQAADAISGSRPGARRESLEAYVERMQHLESIAMAHEGVTRAYAMQ
AGREVRIMVAPEIVDDAMSQVLAREIATEVETNLTYPGQIRITVVRESRATELAH
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggaatggctgggctgggtaattgccgggttgctgggcatcgtcctgaccgttctcacg
tggcggcaacgacgagccgcgctatccttcatacaggaaaaagccaggatcgagcgccga
agccggtcggatgccgcctccataagaaaacaggccatggaggccgcggagcagctgcgg
actgatgcggagcgagccctcgaacaggcccaggagaggtcacgcgaagctgctgcggac
atcgataggcgtcgtgacgacttggaggctgccattgctgctcagcgggctgagctgcgc
gaacaacgcagtgcccaggagcgtcatgaggaacgtcttcatgagagagaggaccgcctg
gcggcggaggctgaaggcctggcaacgcgggcggaactgctggagcagcagcgcgtggaa
ctgcgcaggaagcgtgaggaaatcgcgggggagcaggagcgtgcccggatagagcttgag
cgggtggcggggctgacggtgtctgctgcgcactccgaggtgatggccgaggcggagcgg
caagcccggcttgccgcagcaaccctggcccgggacatagaggagagcgcgagagctgaa
gctgataggcgggctcgatcgatagtggtcacggcgatccagcgatgcgcggctgagcag
actagcgagtctgtggtttccagcgtcgatcttcccggggatgatatgaaagggcggatc
atcgggcgtgagggccgcaacatacgggcctttgaacagatcacaggcgttaatgtgatg
gtggatgacaccccggagacggtgctgttgagctgcttcgatccggtgcggcgtgaggct
gcccggctgaccctgacagacttggtcgctgacgggcgtatacatcctgcacgcatagaa
gaggtgcacgcccggagcctgcggctcttggacgagcgcatcaagacggttggcagcgag
gcgttgctggaggtgggtatcgcggatttgcacccggacctgctgcccatcatcggttct
cttgcctaccggaccagctttggccagaacgtgcttgctcacctgatcgaatgcgcccac
ctggccggggtcatggcagctgaactgggacttgacgtggcgcagtgcaagcgcgctgcc
ttcctgcatgacattgggaaggccctgacgcacgagtctgaggggccacatgcgatcgtc
ggagctgatctgctgcgccggcatggggagaaccccgacattgtccatgccgtagaggct
caccacaacgaggtcgagccccataccgtcgaagccgttcttacgcaggcagcggatgcc
atatccggttcccggcctggggcgcgccgcgagtcgttggaagcctatgtggaacggatg
cagcacctcgagtccatcgcaatggcccatgagggggtgacgcgtgcctatgccatgcag
gcaggccgggaggtcaggatcatggtggcgcctgagattgtggatgatgcgatgagtcag
gtcctggcacgcgagatcgccaccgaggtggagaccaatctcacctatccagggcaaatc
cgtatcaccgttgtgcgtgagtcacgtgccactgagctggcccattga
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