Arachnia rubra: J5A65_08885
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Entry
J5A65_08885 CDS
T07339
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
arub
Arachnia rubra
Brite
KEGG Orthology (KO) [BR:
arub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
arub03036
]
J5A65_08885 (smc)
Chromosome and associated proteins [BR:
arub03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
J5A65_08885 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
SMC_hinge
AAA_21
AAA_15
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QUC07070
LinkDB
All DBs
Position
complement(1948836..1952354)
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AA seq
1172 aa
AA seq
DB search
MYLKQLILRGFKSFASATTLDFEPGITCIVGPNGSGKSNVVDALSWVMGEQGAKSLRGGK
MEDVIFAGTSKRAPLGRAEVQLTIDNSDGALPIEYSEVTITRTMFRSGGSEYAINGIPSR
LLDVTELLSDSGIGREMHVIVGQGQLDAILQATPESRRGFIEEAAGVLKHRKRKEKAVRK
LEGTKANLERLQDLIGELQRQLKPLGRQAETARRAAIIQAEQRDAKARLLADDLQSAREA
LAADLADEAAAAEAKERAEAEARAALDAEEAAEQELKEASQHFDRCQERWYALAALRERV
SSTLSVAAERMRHGDAQPAIDTSSRDPESLEAEAREVRAREAELAEDIEQAQAALRETSG
HRGEVETQHSEAEQAYSAALRAVADRREGLARLKGQVASVRSRLEAGQGEEQRLAGRREE
ALARAREAADRYRKAENTLAGLGTDESSLDATWERASKAVAEREAEVGGLVEQETRTARE
KAALTARAEALRLATQQRDGSSDLLGQRGILGRMGDLIQVAPGWEQAVAAGLGAAAEAVV
AAGLDDALAAIAHLTEQDLGRAPVVVAGAAAQDKVPLLDLITAPTELEGALSRLLAGVVA
VEDLAAARASVADSPALVAVTRAGDRLSGWLVEGGSAAKPSLLALNAELAEAEEHLAQAA
AAADRQRFALEAARSDLQQARDEESAALAALHESDAQFTAVSDELGAHRQAQAAATREAD
RLSAAIAAAQEGRAEHEGKLAELQARLSAASDEELADPDPARRDELAVTARAARQAEMEA
RLRLRTAEEQARSLAGRADGLLRAAAAERQSRARARARAEQLRREAAVGKTVHEAALRLS
AAVEATMERAAASRDSAESRRRAAEAATVAARQASRAAGQRLEELMRGAHRDELARIEHR
MRIEQLEERSLGELGLEGDQLVAEYGPEQPIAVLTRPDGSALGPDDEVPEPVAYVRAEQE
KRLRRAERGLAALGRVNPLALEEFEALKIRHAFLAEQLADLKQTRADLLALIDDVDQRVQ
EVFEAAYRDVERTFGKVFERLFPGGEGKLVLTEPGNWLETGVDVEARPAGKQVKRLSLLS
GGERSLVAVAFLVSLFIARPSPFYILDEVEAALDDANLGRLLAIYEELRQSSQLLVITHQ
KRTMEIADSLYGVTMRGDGISTVVSQRLQQRD
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgtacctcaaacagctgatcctcaggggattcaagtctttcgcttcggccaccaccctt
gacttcgagccgggcatcacctgcatcgtcggacccaacgggtccggcaagtccaatgtg
gtcgacgccctgagctgggtgatgggtgaacagggggccaaaagcctgcgcggcgggaag
atggaggacgtcatcttcgcgggcacgtccaaacgcgccccgctgggacgggcggaagtg
cagctgaccatcgacaactccgatggcgcactgcccatcgagtactcggaagtgacgatc
acccgcaccatgttccgcagcggcggctccgagtatgccatcaacggcatcccctccagg
ctgctggacgtgacggagctgctgagcgactccggcatcggccgcgaaatgcacgtgatc
gtcgggcagggccagctcgacgccatcctccaggccactcctgagtcccggagaggattc
attgaggaggccgccggggtcctcaaacatcgcaagcgcaaagagaaggccgtccggaaa
ctggaagggacgaaggcaaacctggaacggcttcaggacctgatcggagaactgcagcgt
cagctcaaaccgctcggccgtcaggccgagaccgcccgtcgggccgccatcatccaggcg
gagcagcgcgacgcgaaggctcgcctgctcgccgatgacctccagagcgcccgggaggcc
ctagctgccgacctcgccgacgaggccgcagcagccgaggccaaagaacgtgcagaggct
gaggcccgggcggccctggatgcggaggaggcagcggagcaggagctgaaggaggcgtcg
cagcacttcgaccgctgccaggagcgatggtatgcgctggcggccctgagggagcgggtg
tcctcgacgctctcggtggcggccgagcggatgcgccacggcgacgcccagcccgccatc
gacacgtccagccgggatcccgagtccctggaggccgaggcccgcgaggtcagggcacgc
gaggctgagctggctgaggacatcgagcaggcgcaggccgcgctgcgggagacctccggg
catcggggcgaggtggagacccagcactccgaggccgagcaggcctactccgcggcactg
cgcgcggttgccgatcggcgggaggggctggcccggctcaaaggacaggtggcctcagtg
cgttcccgccttgaagccggccagggcgaggagcagcgcctagccggccgccgggaggag
gccctcgcgcgggcgcgggaggccgcggaccggtaccggaaggccgagaacaccctcgcc
gggctgggcaccgacgagtcgagcctggacgctacctgggagagggccagcaaggctgtc
gcagagcgtgaggccgaagtcggagggctggtggagcaggagacacgcaccgcgcgggag
aaagccgctctcaccgcacgtgcggaggccctgcgcctggcgacgcagcagcgtgacggc
tcctccgacctgctggggcagcgcgggatcctgggacggatgggagacctcatccaggtg
gcccccggctgggagcaggccgtcgcggcagggcttggagccgcggccgaggcggtcgtg
gcagccgggcttgacgatgccctggccgccatcgcgcacctgactgagcaggacctgggg
cgggctcccgtggtggtggccggcgcggcggcgcaggacaaggtgccgctgctcgacctg
atcaccgcgccgacagagctagagggtgccttgagccggctgctggccggtgtcgtcgcc
gtcgaggacctcgccgctgccagggccagtgtcgcagacagtccagctttggtcgctgtc
accagggcaggggatcggctgtccggctggctggttgaaggcgggtctgccgcgaaaccc
tcactgctggccctgaacgccgagctcgcagaagccgaggagcacctggcgcaggccgct
gcagcagcggatcggcagaggttcgccctggaggccgcccgcagcgacctgcagcaggcc
cgcgacgaggagtcggcagccctggccgctctgcacgagtccgatgcgcagttcaccgca
gtctcggatgagctcggtgctcaccgacaggcgcaggccgccgcgacccgcgaggccgac
cgcctgagtgccgccatcgccgcggcccaggagggccgggcggagcatgagggaaagctg
gctgaactgcaggcacggctttccgccgcgagcgacgaggaactggccgaccctgacccc
gcacggcgcgacgagctggcggtgacggcgcgggcggcccggcaggccgagatggaggca
aggctgcgattacgcaccgccgaggagcaggcccggtctctggcaggccgggccgatggg
ctgttgcgtgccgccgccgcggaacgccagtcccgggcacgcgcccgggcccgggctgag
cagctgcggcgtgaggccgcggtgggcaagactgtgcacgaggccgcgctgcgcttgtcc
gcagcggttgaggccaccatggagcgagccgcggccagccgtgattccgcggagtcccgg
cgccgcgcagctgaagccgccacggtggcagccagacaggcgtccagggcggcggggcag
cgtctggaagaactcatgcggggcgctcaccgcgatgagctggcccggatcgagcaccgg
atgcggatcgagcagctggaggagcggagcctgggcgagctggggctggagggggaccag
ctggtcgctgagtatggccctgagcagcccattgcggtcctcacccgcccggacgggtcg
gcgcttggccccgacgacgaggtgcctgagccggtcgcctacgtgcgcgccgaacaggag
aaacggctccgccgcgccgaacgcgggctggcggccctcggccgggtaaacccgctggcg
ctcgaggagttcgaggccctgaaaatccggcatgcctttctggcggagcagcttgccgac
ttgaaacagacccgggccgacctgctagcgctgatcgatgacgtcgaccagcgcgtccag
gaggtcttcgaggccgcctaccgcgatgtggagcgcaccttcgggaaggtcttcgagcgg
ctcttcccgggcggtgaggggaaactggtgctgaccgagcccggcaactggcttgagacg
ggcgtcgatgttgaggcccggcctgctggtaagcaggtcaagcgactttcactgctgtcg
ggcggggagcggtccttggtggctgtggccttcctggtcagccttttcatcgcgcggccg
agccccttctacatccttgacgaagtggaggcggcccttgacgacgctaatctcggacgt
ctgctcgcgatctatgaggaactgcggcagagctcccagctgctggtcattacccaccag
aaacgcaccatggagatcgccgacagcctgtacggggtcaccatgcggggagacggcatc
tccaccgtggtcagccagcgcctgcagcagcgggattag
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