Arachnia rubra: J5A65_09015
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Entry
J5A65_09015 CDS
T07339
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
arub
Arachnia rubra
Brite
KEGG Orthology (KO) [BR:
arub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
arub03016
]
J5A65_09015 (truB)
Enzymes [BR:
arub01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
J5A65_09015 (truB)
Transfer RNA biogenesis [BR:
arub03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
J5A65_09015 (truB)
Prokaryotic type
J5A65_09015 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
QUC07093
LinkDB
All DBs
Position
complement(1976796..1977659)
Genome browser
AA seq
287 aa
AA seq
DB search
MSAESGIVIIDKPAGVTSHHVVGRLRRLLGTRKVGHAGTLDPMATGVLILGVNRATRLLG
HLALHDKRYLATVRLGQSSTTDDADGEVVAVADASGLDTTALESALAALRGKIWQVPSAV
SAIKVGGKRAYDLVRQGTEVNLNAREVEVSRLEVVSCCPGDGVLDVGIDVECSSGTYVRA
IARDLGKSLGVGGHLVSLRRVRIGGYDLSEAVTLGEEPPGLMPMAEAARRSFPCVTVDSR
RAADVGFGRRLDVSVPAGVTGIISPEGALLALYRPDGEGSRPVAVLV
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgccgaatccggcatcgtcatcatcgataagccggcgggggtgacctcccaccat
gtggtggggcgcctccgccgactgcttggcaccaggaaagtcgggcatgcgggcacgctg
gatcccatggccaccggggtgctgatccttggggtgaaccgggcgactcggctgctcggg
cacctcgctctccacgacaagcgatacctggccacggtgcgcctcggacagagctccacg
acggatgatgcggacggcgaagtcgtcgcggtggcagatgcctccggcctggatacaacg
gcgctggagtcggcactcgctgctctgcgcggcaagatctggcaggtgccatcggcagtc
tcggccatcaaggtgggcggtaagcgtgcctatgacctggtgcggcagggaaccgaggtg
aacctcaatgcgcgtgaggtggaggtctcccgcctggaggtggtgtcctgctgccccgga
gacggggttctcgacgtcggcatcgatgtggagtgctcctctggcacctacgtacgtgct
atcgcccgggacctggggaagagcctcggcgtcggtgggcatctggtctcgctccggcgt
gtgcgcatcggcggttatgacctgtcagaggctgtaacgctgggggaggagcctccggga
ctcatgccgatggccgaagcggccaggcgcagtttcccgtgcgtcacggtggattctcgc
agggctgctgacgtgggattcgggcgtcgcctggatgtttccgtcccagccggggtgact
gggatcatctcgccggaaggtgctctgctcgccctctaccggcctgatggagagggctct
cgtcccgttgccgtgctggtctga
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