KEGG   Arachnia rubra: J5A65_11770
Entry
J5A65_11770       CDS       T07339                                 
Symbol
cas3u
Name
(GenBank) type I-U CRISPR-associated helicase/endonuclease Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
arub  Arachnia rubra
Brite
KEGG Orthology (KO) [BR:arub00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:arub02048]
    J5A65_11770 (cas3u)
Enzymes [BR:arub01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     J5A65_11770 (cas3u)
Prokaryotic defense system [BR:arub02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    J5A65_11770 (cas3u)
SSDB
Motif
Pfam: Cas3-like_C_2 Helicase_C Cas3_HD ResIII
Other DBs
NCBI-ProteinID: QUC07600
UniProt: A0ABX7Y360
LinkDB
Position
2596416..2599304
AA seq 962 aa
MIASDFDQFMLEVHGHPPFPWQSAAVVDILDKGCWPSLVDIPTGLGKTSMLDVAVFVLAM
SAGGETPPGLGRRRIFFVVDRRIVVDQAEMHGKRISEALETATGGSISAEIAARIRKLCG
SSGANPVLPVVKMRGGTTWDAAWLPRPDLPAIITGTVDQVGSRLFFRGYGVSTRRRPIDA
ALVGTDSVIMIDEAHLAQALISSLGAAHRLDSSQILGLPQASVIRLSATSGEQPEGWVTS
FDEEAHLRDVTAHKRLTASKTLTLVTPPGGKKLKPHQAVEKLVKYAAEAVTSDTSRVLVV
CNTVDRAREVHQELKSSNSLLQGTEVLLLMGRSRPLDREAIAGRVTELFGADRDEMPRPA
ILVATQTVEVGIDLDATTLITETAAFDALIQRIGRLNRRGELSQAKVVVVEDGDPKPPVY
GESKIKTADFLRSSTEETGVLDVSPLALRHLTTPEDLAAHPPLLPLLLPAQLDAWVRTAP
APTTDPPLDPYLHGIDKSVAPVTLAWRDGLLDDFGDRIPAEEAGASIDALPLRAEECIEI
SLGALQHWLLGKKAWPVGDTEDYDDADIPFGDDDADSMVLHRTEGKSGLSSWDWVSADSL
RPGDMVVAPTELGGLDRFGWAPTSTEKVTDVAELAAFRRGRAALRLDPQLPDRLGLPAPS
NLRDLVQDWRNCDDPVDRDELKATIVGTVRSWLAQQVEPGAESVWTSADFAVLGAQLSDQ
AALTQINEDAVPVLREISPKHDLPDVDEGNSDETSHLNQRVTLAVHLNTVGTRAQDIACN
LGLPEPLRRTVVDAARWHDLGKVDPRFQAMLFGGDPIRAELADEPLAKSGMPPGDRQRYI
RARTLSKLPRGARHEAWSEALVTEHLSGMPEEYPGDPELLCHLIASHHGHARPLLPPVAD
NGKHVLTTTVDGKEVTAPLPIGVRLSDADRFARLNARYGRWGLALLEAIVRCADMTVSSE
GS
NT seq 2889 nt   +upstreamnt  +downstreamnt
atgatcgccagtgacttcgaccagttcatgctggaggtgcacggccaccctccattcccc
tggcagtcagcagctgtcgtcgatatcctcgacaagggctgttggccttcgctagtggac
attcccaccgggctcggtaagacctcgatgctcgatgtggctgttttcgtactagcgatg
agcgctggcggcgagacgccacctggattggggcggcgacggattttcttcgtggtcgac
cgccggatcgtcgtcgatcaagccgagatgcatggaaaacgcatctctgaggccctcgaa
acagcaactggcggcagcatctctgctgagatcgccgcccggatccggaaactatgtggt
tcctctggcgccaacccggtgctcccagtcgtcaagatgcggggcgggacaacctgggat
gcggcatggctaccccgccctgacttgcccgcaatcatcaccggcactgtggatcaggta
ggtagccgcctattcttccgcggctacggggtcagcacgcgaaggcggcccatcgacgca
gcactggtcggaaccgattccgtgatcatgatcgacgaggcacatctagcgcaggccttg
atttcgtccctgggagctgcccatcgcctggactccagccagattctcggcttgccccag
gcctcggtcatccgcctcagcgccacgagcggggaacagccagaaggatgggttacctct
ttcgatgaggaagcccatctacgtgacgtcacggctcacaagcgcctgactgcttcaaag
acgctgactttggtcacacctcctggagggaaaaagctcaaacctcaccaagcggttgag
aaactggtgaagtatgccgccgaagcagtcacgagtgacacatcccgcgtcctggtggtg
tgcaacacagtggaccgggctagggaagttcaccaagagctcaagagttccaatagccta
ctgcagggcaccgaagttctcctgcttatggggcgttcccgtcccttggaccgggaggcg
atagcaggccgggtgaccgagctgttcggcgcagaccgggatgaaatgccaagaccggca
atactcgtcgccacacagacggtagaagtcgggattgacctcgatgcgaccaccctcatc
acagaaaccgccgcttttgatgcgctgattcaacgcatcggcaggctcaaccggcgaggc
gagctatcacaagcaaaagtcgtcgtggtcgaggatggtgatccaaagcctccggtctac
ggagagtccaagatcaaaaccgctgatttcctacgatccagcacagaggaaaccggggtg
cttgatgtttcgccgttggcgttgcgacacttgaccacgccggaagacttggccgcgcat
cctccgctacttccgcttcttctgccagcccagcttgacgcctgggtacgtactgccccg
gcccccacaaccgatcccccgctggatccgtacctgcatggtattgacaagtcagtggcg
ccggtcacgttggcttggcgtgacgggctcctggatgacttcggtgatcgcattccagct
gaggaggctggtgcatctatagatgccctaccgctccgggccgaggagtgtatagagatt
tcccttggagcgttgcaacactggctgctcggaaagaaggcctggccggtgggtgacacc
gaggactacgacgatgccgacattcctttcggagatgacgacgccgattcgatggtgctt
caccgaaccgagggaaaatcgggtctgtcttcctgggactgggtatctgccgattcgctg
cgcccaggcgatatggttgtcgccccgaccgagctgggtgggctcgaccggttcggttgg
gctcccaccagcacggagaaagtaaccgacgtagccgaactggccgctttccgacgcggc
cgggccgccttgcggctcgacccacagttgcctgatcggctcggcctgccagcgccttca
aacctcagagatctcgtgcaggactggcgtaattgtgatgaccccgttgatcgggatgag
ctcaaggcaaccattgtcggcacagtccgttcctggttggctcaacaggttgagcctggt
gctgagagtgtttggacctcggcagacttcgctgttcttggcgcccagctctctgatcag
gccgcccttacgcagatcaatgaagacgccgtcccagtactacgagaaatctcaccaaag
cacgacctgccagatgtggatgagggaaactctgacgagacctcgcacctgaatcaacga
gtcactttggcagtacacctaaacactgtgggaacacgtgcacaggatatcgcctgtaac
ctgggcttgcctgagccgcttcgccgaactgtggtcgacgctgcgcgctggcacgacttg
ggcaaggtggatcctaggttccaggcgatgttgttcggcggggatccgatccgagccgag
ctggcggatgagccactcgccaaatccggtatgcctccaggtgatcgtcagcgatacatc
cgggcaaggacactcagcaagttgccgcgaggcgcccggcatgaggcctggtctgaggcc
ctcgtcaccgagcatctttcaggcatgccagaggaataccccggggatcccgagttgctg
tgtcatttgatcgcaagccatcacgggcacgcccggcctctcttgccgcctgtggccgat
aacggcaaacacgtcttgaccacaaccgtcgacggcaaagaggtgaccgctccattgcct
attggggtgcggttgtcagatgccgatcgtttcgcccggctcaatgcccgctacggccga
tgggggcttgccctcttggaggccatcgtacggtgcgctgacatgactgtgtcctcggag
ggatcatga

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