Altererythrobacter rubellus: QQX03_03330
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Entry
QQX03_03330 CDS
T09134
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
arue
Altererythrobacter rubellus
Pathway
arue03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
arue00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QQX03_03330 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arue03021
]
QQX03_03330 (rpoC)
03400 DNA repair and recombination proteins [BR:
arue03400
]
QQX03_03330 (rpoC)
Enzymes [BR:
arue01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QQX03_03330 (rpoC)
Transcription machinery [BR:
arue03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QQX03_03330 (rpoC)
DNA repair and recombination proteins [BR:
arue03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QQX03_03330 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Apocytochr_F_C
Peptidase_M23
RPOC_hybrid
YqfD
Motif
Other DBs
NCBI-ProteinID:
WIW96152
UniProt:
A0A9Y2B3M6
LinkDB
All DBs
Position
673551..677828
Genome browser
AA seq
1425 aa
AA seq
DB search
MNELSKFTNQLAKPETFDQIQIGIASPERIRSWSFGEIKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRMKYKGVVCEKCGVEVTVTKVRRERMGHIELAAPVAHIWFLKSL
PSRIGLLLDMQLKQLERVLYFEHYVVIEPGLTPLEKFQLLTEDELLEAQDEYGEDAFSAG
IGAEAVKAMLMDLDLEQERDDLLEELATTKSTLKPKKIIKRLKVVESFIDSGNRPEWMIL
EVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIVRNEKRML
QESVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTGP
ELKLHQCGLPKKMALELFKPFIYARLDAKGLSMTLKQAKKWVEKERKEVWDILDEVIREH
PVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQLE
ARVLMMSTNNILSPANGKPIIVPSQDMVLGLYYLSMERQEKTPEFIEEKDGTKIEKLPRF
SDMAEVHQALEVKSVTLHSKIIARVPQADENGNVSMKRFITTPGRMLIGECLPKNHKVPF
DIINRLLTKKDIGDVIDEVYRHTGQKDTVLFADAIMVLGFRHAFKAGISFGKDDMIIPHE
KDDLVDQTKSLVADYEQQYQDGLITQQEKYNKVIDAWSRCGDQVADAMMAKIKAQPIGDD
GKEAQINSIYMMSHSGARGSPAQMKQLAGMRGLMAKPSGEIIETPIISNFKEGLTVLEYF
NSTHGARKGLADTALKTANSGYLTRRLVDVSQDCVIVEEDCKTENALEMRAIVQGGSVIA
SLGERILGRTLAEDAVNAATGEVIAKAGTLLDEPMVKAIEDAEVQSAKIRSPLVCEAAQG
VCGTCYGRDLARGTPVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQLNETSHLEAIS
DGKVEYRDMPTITDSKGRILSLARNGEIAVIDKEGREREIHKVPYGTVLMNKDGAQVKEG
DRLAEWDPFTLPIITEQSGVVKYQDLVEGTTLEERTDDATGIAQRVVTENRATGRKKKED
LRPRMTLLGEGQTEEGETEAQRYMLAPGTTLSVQDGQTVQAGDILARASREAAKTRDITG
GLPRVAELFEARLPKDMSVIAKISGKIEFVREYKAKRKIAIVPEEGDRVEYLIPKTKVID
VQEGDFVKKGDTLISGSPNPHDILEVMGVEALAEYLVNEIQEVYRLQGVKINDKHIEVIV
RQMLQKVEITDGGDTTLLPGEQVDYEEMLQYNAKLTKNKKPAQGTPILLGITKASLQTRS
FISAASFQETTRVLTQASVEGKKDTLIGLKENVIVGRLIPAGTGAGMNRMRVMASSRDAA
LRAQWKKQQETLAAANAPEPEPVADAIPSEDAMKAAMGGGETAAE
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaactgagcaaattcaccaatcagctggcaaagccggaaacattcgaccagatc
cagatcggcatcgcttcgccagagcgtatccgcagctggtctttcggcgagatcaagaag
ccggaaaccatcaactaccgtacgttcaagccagaacgtgacggcctgttctgtgcgcgt
atctttggcccggtaaaggactacgaatgcctttgcggcaagtacaagcgcatgaagtac
aaaggcgtcgtctgcgagaagtgcggcgttgaagtgactgtgaccaaggtgcgtcgtgag
cgcatgggccacatcgaactggctgcgccggttgcgcatatctggttcctgaagtcgctg
ccttcgcgcatcggcctgctgctcgacatgcagctcaagcagctcgagcgtgtgctctat
ttcgaacattatgtcgtgatcgagccgggcctcacgccgctggagaaattccagctgctg
accgaagacgaactgctcgaagcgcaggacgagtatggcgaagacgcattcagcgccggc
atcggtgcggaagcggtcaaggccatgctgatggatcttgatcttgagcaagaacgcgat
gacctgttggaagagcttgcaacgaccaagtctacgctgaagccgaagaagatcatcaag
cggctgaaggttgtcgaaagcttcatcgattcgggcaaccgcccggaatggatgatcctt
gaagtgatcccggttattccgcctgagctgcgcccgctggtgccgctggatggtggccgt
ttcgcgacgtccgatctcaacgatctctatcgccgcgtgatcaaccgtaacaaccgactg
aagcgcctgattgaactgcgtgcgccggacatcatcgtccgcaacgagaagcgcatgctt
caggaatcggtcgacgcattgttcgacaatggtcgccgtggccgcgtaatcaccggcgcg
aacaagcgcccgctgaagtcgctgtccgacatgctcaagggcaagcagggccgcttccgt
cagaacctgctcggtaagcgcgtcgactattcaggccgttcggtcatcgtgaccggtccg
gaactgaaactgcaccagtgcggtctgccaaagaaaatggctttggagctgttcaagccg
ttcatctacgcacgtctcgatgcgaagggtctgtcgatgaccctgaagcaagcgaagaag
tgggtcgagaaagagcgcaaggaagtctgggacatcctggatgaagtgatccgtgagcac
ccggttctgctgaaccgcgcgcctacgcttcaccgtttgggcatccaggcgttcgagcct
gtgctgatcgaaggtaaggcgatccagcttcacccgctggtttgcgccgcatttaacgct
gactttgacggtgaccagatggctgtgcacgttccgctgagcctggaagctcagctggaa
gcgcgcgtcttgatgatgtctaccaacaacatcctgtcgccagccaacggcaagccgatc
atcgtgccttcgcaggacatggttctgggtctctactatctctcgatggaacgtcaggag
aagacgcctgaattcatcgaagagaaggacggcaccaagatcgagaagctgccacgcttc
tctgacatggctgaagtgcatcaggcgctggaggtcaagtcggttaccctgcacagcaag
atcatcgctcgcgtcccgcaagccgatgaaaacggcaatgtctcgatgaagcgctttatc
acgacgccgggccgcatgctgatcggtgaatgtctgccgaagaaccacaaggttccattc
gacatcatcaaccgccttctgacgaagaaagatatcggtgacgtgatcgacgaagtgtac
cgccacacgggccagaaggacaccgtgctgttcgctgacgcgatcatggtgctgggcttc
cgtcacgcgttcaaggccggcatctctttcggcaaggatgacatgatcatcccgcacgag
aaagatgatctggttgaccagaccaagtccctggttgctgactatgagcagcagtatcag
gatggtctgatcactcagcaagagaagtacaacaaggtgatcgacgcctggagccgttgc
ggtgaccaggtggccgatgcgatgatggcgaagattaaagcgcagccaatcggtgacgat
ggcaaggaagcgcagatcaactcgatctatatgatgagccactctggtgcgcgtggttcg
ccagcgcagatgaagcagcttgccggtatgcgcggccttatggccaaaccatctggcgag
atcatcgaaacgccgatcatctcgaacttcaaggaaggtctgaccgttcttgaatacttc
aactcgacccacggcgcgcgtaagggcctggctgatacagcgctcaagacggcgaactca
ggttacctgacccgccgtctggtggacgtgtcacaagactgcgttatcgtggaagaagac
tgcaagaccgagaacgcgctggaaatgcgcgcgatcgttcagggcggttcggttatcgca
tcactgggtgaacgtatcctgggccgtacgctggccgaagacgcggtcaatgccgcaact
ggcgaagtgatcgccaaggccggcacgctgctcgacgaaccgatggtgaaagcgatcgag
gatgcggaagttcagtcggccaagatccgttcaccgctggtttgtgaagcagcgcagggc
gtttgcggcacatgctacggccgtgacctggctcgcggtacaccagtgaacatcggtgaa
gctgtcggcgttatcgcggcacagtcaatcggtgagcctggtacgcagctgaccatgcga
acgttccacatcggtggtgcggcgcagctcaacgaaaccagccaccttgaggctatctct
gacggtaaggtcgaatatcgcgacatgccgacgatcacggattcgaagggccgtatcctt
tcgctcgcccgcaatggtgagattgccgtgatcgataaggaaggccgtgagcgtgaaatt
cacaaggtaccttatggtacggttctgatgaacaaggatggcgcgcaggtgaaggaaggt
gatcgtctggcggaatgggatccgttcacgctgccgatcatcaccgagcaatccggtgtc
gtgaagtatcaggatcttgtcgaaggcacgactttggaagaacgcaccgacgatgccacc
ggtatcgctcagcgtgttgtaacagagaaccgtgcaaccggccgcaagaagaaggaagat
ctgcgtccgcgtatgacacttctgggcgaaggtcagaccgaagaaggcgaaaccgaagcg
cagcgttatatgctggctccgggtacaaccctttcggtgcaggacggtcagacggttcaa
gccggtgacattctggcacgtgcatcgcgcgaagccgcgaagacgcgtgacatcaccggt
ggtctgccacgtgttgccgaactgttcgaggcgcgcttgccaaaggacatgtcggttatc
gccaagatttcgggcaagatcgaattcgtccgtgaatacaaagcgaagcgcaagattgcg
atcgttcccgaggagggggatcgcgtcgagtacctgatcccgaagaccaaggtcatcgac
gttcaggaaggcgacttcgtgaagaagggcgatacgctgatctctggttcgccgaacccg
catgacattcttgaagtcatgggcgtcgaagcgctggctgaatatctcgtcaacgaaatt
caggaagtgtaccgacttcagggcgtgaagatcaacgacaagcatatcgaggtgatcgtt
cgccagatgctgcagaaggtcgagatcaccgatggcggcgacaccaccttgctgccgggc
gagcaggtcgattacgaggaaatgctccagtacaacgccaagttgacgaagaacaagaag
cctgcccagggtacgccaatcttgctcggcatcaccaaggcgtcgctacaaacacgcagc
ttcatctctgctgcatcgttccaggaaaccacccgcgtgctaacgcaggcttcggttgaa
ggcaagaaggacacgctgatcggtctcaaggagaacgtgatcgtgggccgcctgatcccg
gctggtacgggcgctggtatgaaccgcatgcgtgtaatggcctccagccgtgacgctgcg
ctgcgtgcacagtggaagaagcagcaggaaacgctggcagcggccaatgcgcctgaacca
gagccggtggctgatgccattccgtcagaagacgcgatgaaggcagctatgggtggcggc
gaaactgctgctgaataa
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integrated database retrieval system
