Altererythrobacter rubellus: QQX03_05100
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Entry
QQX03_05100 CDS
T09134
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
arue
Altererythrobacter rubellus
Pathway
arue03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arue00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QQX03_05100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arue03019
]
QQX03_05100
03009 Ribosome biogenesis [BR:
arue03009
]
QQX03_05100
Enzymes [BR:
arue01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QQX03_05100
Messenger RNA biogenesis [BR:
arue03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QQX03_05100
Ribosome biogenesis [BR:
arue03009
]
Prokaryotic type
rRNA helicases
QQX03_05100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
WIW96478
UniProt:
A0A9Y2BAW7
LinkDB
All DBs
Position
complement(1023131..1025050)
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AA seq
639 aa
AA seq
DB search
MSFESLPPILGEALAERGYSAPTPVQAATIAPDAAGRDLIVSAQTGSGKTVAFGLALAPE
LLGEIRGTPLTERPLALVIAPTRELALQVSRELGWLYEKAGLRIANCVGGMDASKERRAL
RSGPAIVVGTPGRLRDHLERGALDLSALVGVVLDEADEMLDMGFRDDLEEILDATPDTRR
TLLFSATMPRAIVRLAERYQSNALRLSLAGEDRGHGDISYQAITVGPSEIENAVVNLLRF
HEAESAICFCATRDSVRRLHATLQNRGFGVVALSGEHSQQERNQALQAMRDRRARVCVAT
DVAARGLDLPTLSLVIHVETPRDAETLQHRSGRTGRAGKKGTAAIIVPYNRRKRVENMLR
GAKIEAKWMDAPTPEAIRKKDHARLMEKLTAPAEYEDDDRAIAAELMERLPAEDIAAALV
QAHRAKMPQPEELLANTPEAREKAKAERHRPGFEDVVWFKMGIGRRQNAEPRWLMPLICR
RGHVTRNEIGAIRVGPNESWFQIPRAIAPKFADTLKRTEASEDEQDAILIEESAEGPRVE
ARNNRKHGAPNVRAKPFRKGPGGKGPGGKAPGGKGSGGKGDGGKPRFKDKRDRKDTPRSG
GEGRSDPFTGKPSSGKPKSGFKGKGAGKPKGKRAGPKQK
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgaatccctaccaccgatcctgggcgaggctctggccgagcgcggctattct
gcacccacccctgttcaggccgctaccatcgcacccgatgccgcgggacgcgacttgatc
gtttctgcgcagaccggctctggcaaaacggtcgcgtttggactggcacttgcgcccgaa
ctgctcggagagattcgcgggacaccgttgaccgaacgcccattggcgctcgtcatcgcg
ccgacacgcgaactggccctgcaagtcagccgcgaactcggctggctctatgaaaaggcc
ggcctgcgcattgcaaactgtgtgggcggaatggatgcgagcaaagaacgccgcgcgctt
cgttccggcccagccattgttgttggtacgccgggccgcttgcgcgaccatctggagcgc
ggcgcgctagacctctctgccctggtcggggttgtgctcgatgaagcggacgagatgctc
gacatgggcttccgcgacgacttggaagaaattctcgatgcaacgccggatacgcgccgc
acgctgctgttttcggccactatgccgcgcgcgattgtgcggctggcagaacgttatcag
tccaatgcgctgcgcctttctttggcgggcgaagatcgcggacacggtgacatcagctat
caggcgatcaccgttggtccgtctgaaatcgaaaacgccgtcgtcaacctgctgcgtttt
catgaagcggaatcagcgatctgtttctgcgcaacgcgcgacagcgtgcggcggctgcat
gcgactttgcagaaccgcggtttcggtgtggtggcgctgtcaggcgaacactcccagcaa
gagcgcaatcaggcattacaagccatgcgcgaccgccgcgcccgcgtttgcgtagcaaca
gacgttgccgcacgcggcctcgatttgccgacgcttagcctagtgatccatgtcgagaca
ccgcgcgatgccgaaacgcttcagcaccgctctggccggacaggccgggcaggcaaaaaa
ggcaccgctgcaatcatcgtgccttataatcgccgcaagcgcgtggagaacatgctgcgc
ggtgcaaagatcgaagcgaagtggatggatgcgccgaccccggaggcgatccgcaagaaa
gatcacgcgcggctgatggaaaagctgactgcaccggctgaatatgaagatgatgaccgt
gcgatcgcagctgaattgatggaacggcttccggcagaggacatcgccgcagcacttgtg
caagcgcaccgcgcgaagatgccgcaacctgaagagctgctcgccaacacacccgaagca
cgcgaaaaggccaaggccgaacgtcaccgccccggtttcgaggatgtggtctggttcaaa
atgggcataggccgccgtcagaatgcagagccgcgttggttgatgccgctgatctgccgc
cgtggacatgttacgcgcaatgaaatcggcgcgatccgggttggcccgaacgagagctgg
ttccagatccctcgcgcaatcgcaccaaagtttgcggacaccttgaaacgtaccgaagcg
agcgaagacgagcaggatgcgatcctgatcgaggaatccgctgaagggccgcgggtggaa
gcgcgcaataaccgcaagcatggcgcgccgaatgtgcgagccaagcctttccgcaagggg
cccggtggcaaggggcccggtggcaaggcccccggtggtaaggggtccggtggtaagggt
gatggcggcaagcctcgcttcaaagacaagcgcgacaggaaggatacgccgcgctctggc
ggcgaaggcagaagcgacccattcaccggcaagccatcttcgggaaaacccaaatcaggt
ttcaaaggcaagggtgcgggcaagcccaaaggcaagcgcgccgggcctaaacaaaaatag
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