Altererythrobacter rubellus: QQX03_07175
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Entry
QQX03_07175 CDS
T09134
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
arue
Altererythrobacter rubellus
Pathway
arue03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arue00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QQX03_07175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arue03019
]
QQX03_07175
03009 Ribosome biogenesis [BR:
arue03009
]
QQX03_07175
Enzymes [BR:
arue01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
QQX03_07175
Messenger RNA biogenesis [BR:
arue03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QQX03_07175
Ribosome biogenesis [BR:
arue03009
]
Prokaryotic type
rRNA processing factors
QQX03_07175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Anti-TRAP
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
WIW94761
UniProt:
A0A9Y2B6C5
LinkDB
All DBs
Position
complement(1418670..1421330)
Genome browser
AA seq
886 aa
AA seq
DB search
MATRMLIDARHHEETRVAVVKNNRIEEFDFESAEHKQIKGNIYLAKVTRVEPSLQAAFVD
FGGNRHGFLAFSEIHPDYYQIPQADREALLAEEAEAAEEEARLRAEEEDRGEMPGDEYDA
EDEESGEALAEDLAEDGVEEIDTSEKDKVSTIEEGLVDGDDDYDGSDDDDDSEGDESDED
DDGDDDRSDSRRGRGRRGRRRQGNGKGKSRAKEVDEVRARRQALRRRYKIQDVIQRRQVL
LVQVVKEERGNKGAALTTYLSLAGRYTVLMPNSSHGGGISRKINSSSDRKRLKQIIADLK
LPKTMGLIVRTAGLSRTKPEIKRDFDYLARLWDEIRQKTLSSTAPALIHSDSDLIKRAIR
DIYNREIEEVVVEGEDGYKLAKQFMKLLMPSHARRIKAYSDPVPLFQRYGAEDQLRAMYD
PVVQLKSGGYLVINPTEALVSIDINSGRSTKQHGIEQTAVATNVEAAREIARQLRLRDMA
GLVVIDFIDMEYNSNVRKVERAMKDALKNDRARIQVGRISGFGLMEMSRQRLRTGVLEAT
TRECPHCDGTGLVRTASSAGLSALRLIEDEAAKGKGTIIRLAASTEAAIYLLNSKRDDLV
EIEQRYGVSVEVIPEGEDEGAKMAVASAGPRPTERPKFEPIVDDDDDDDLPEEVFGAEED
DYSAAKKNRRRRRGGRGRSKKRREDQVEGEGSEDEAERPGTETDDDGEEKPKKRRRRGGR
GRRGKGKSVDEGATENEAAEVGAEAEADTVSDAEIADDAPTEKSKRKRAPRRKKADTEAM
ADADAPAATEASEAPVEEAKPKKKRAPRKKKAHAESATDEVTSSADEAPAEEEKPKKKRA
PRKAKAASVSAETRTAEASEQNSTADKADDDGKPKRGWWQRTFGEE
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgcgcatgctcatcgacgcgcgccaccacgaggagactcgggtagcggtagtc
aagaacaaccggatcgaagaatttgatttcgaatctgccgaacacaaacaaatcaaaggc
aacatttacctcgccaaggtaacaagggtcgaaccgtcgctgcaggcagctttcgtcgac
tttggcggcaaccgtcacggtttcctggcctttagcgaaatccatccggactattaccag
atcccgcaagcggatcgcgaagcgctgctcgctgaagaagccgaagcagcagaggaagaa
gcccgcctgcgcgccgaagaggaagatcgcggcgaaatgcccggcgacgaatatgacgcc
gaagacgaagaatctggcgaagcgctcgccgaagatctagccgaagacggggtcgaggaa
attgacacctcagagaaggacaaggtttcaactatcgaagaaggtctcgtcgatggcgac
gacgattacgatggttcggacgatgacgacgactcagaaggcgatgagtccgacgaagat
gacgatggcgatgatgacaggagcgattctcgccggggtcgcggacgccgtggacgccgc
cgccaaggtaatggcaaaggcaagagtcgcgccaaggaagtcgacgaagttcgcgcacgc
cgtcaggctctgcgccgccgctacaaaattcaggatgtaatccaacgccgccaggttctg
ttggtgcaggtcgtgaaagaagagcgcggcaacaagggcgcagcccttaccacctatcta
agtctcgctggtcgctacacagtgctgatgccgaacagcagtcacggcggcggaattagc
cggaagatcaattcatccagcgaccgtaagcgcctgaagcaaattattgcggatttgaag
ctgccgaagactatgggtcttattgttcgaacagctggcctttcgcggacgaagccagag
atcaagcgcgacttcgattaccttgctcgcctttgggatgagatccgccagaagacgctg
tcgtctaccgcgcctgctttgatccactcggattccgacctgatcaagcgtgcgatccgc
gacatttacaatcgcgaaattgaagaagtcgtcgttgaaggcgaagatggctacaaattg
gccaagcagttcatgaagctgttgatgccaagccacgcgcgccggataaaggcatattcc
gatccggtcccgctgttccagcgctacggagcggaagatcagttgcgcgctatgtatgat
cctgtcgtgcagctgaaatcaggcggctatctggtcatcaaccccaccgaagctttggtg
tcgatcgacatcaactcaggccgatcaactaaacagcacggcattgaacaaaccgctgtc
gcgacgaatgtcgaggcagcgcgcgagatcgcacgtcagcttcgcctgcgcgatatggcc
ggacttgtcgtgattgacttcatcgacatggaatacaattccaatgtccgcaaagtcgaa
cgcgcgatgaaagacgcgctcaaaaacgatcgtgcgcggattcaggttggtcgcatttcc
ggcttcggtttgatggagatgagccgccaacgcctgcgcacaggcgtgttggaagcgacc
actcgcgaatgcccgcattgtgatggtaccggtctggttcgcacagcatccagtgcgggg
ctttccgcgctgcgcttgatcgaagatgaagctgcgaagggcaaaggcacgattatccgc
cttgctgccagcaccgaagcagccatctatctgctcaattcgaagcgtgacgatctggtc
gagatcgaacagcgttacggtgtgagtgtagaggtaattcccgaaggcgaagacgaaggc
gcgaaaatggcggttgccagcgctggccctcgccccaccgaacgaccgaaattcgaacca
attgtcgacgatgatgacgatgacgatctgcccgaagaggtattcggcgctgaggaagac
gattacagcgcggctaagaagaatcgccgccggcgccgtggtgggcgtggccgcagtaag
aagcgtcgcgaagaccaagtcgagggcgaaggcagtgaagacgaagctgagcggcccgga
accgaaactgacgacgacggcgaagagaagccaaagaaacgtcgccggcgtggtggcaga
ggccgtcgtggcaaaggcaagtcagttgacgaaggcgcgacagaaaacgaagcagccgag
gttggtgccgaggcggaggctgacaccgtttccgatgcagaaatagccgatgatgcaccg
acagaaaagtccaagcggaagcgcgcccctcgccggaagaaggcagacactgaagcgatg
gctgacgccgacgctcccgcggcgaccgaggctagcgaagcgcctgttgaagaggcaaag
ccgaaaaagaagcgcgcgccgcgaaagaaaaaggcccacgcagaatccgcaacggatgaa
gtgacttcatctgccgatgaagccccggccgaagaagaaaagccgaagaagaagcgcgcg
ccgcgcaaagccaaggccgcttctgtaagcgctgagaccagaacagccgaggcaagcgag
caaaattcgaccgctgacaaggccgatgatgatggcaagcccaaacgcggctggtggcag
cgaacctttggcgaggaatga
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