Altererythrobacter rubellus: QQX03_08940
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Entry
QQX03_08940 CDS
T09134
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
arue
Altererythrobacter rubellus
Brite
KEGG Orthology (KO) [BR:
arue00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arue03032
]
QQX03_08940 (topA)
03400 DNA repair and recombination proteins [BR:
arue03400
]
QQX03_08940 (topA)
Enzymes [BR:
arue01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
QQX03_08940 (topA)
DNA replication proteins [BR:
arue03032
]
Prokaryotic type
DNA Topoisomerases
QQX03_08940 (topA)
DNA repair and recombination proteins [BR:
arue03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QQX03_08940 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WIW95082
UniProt:
A0A9Y2F5R5
LinkDB
All DBs
Position
complement(1791262..1793802)
Genome browser
AA seq
846 aa
AA seq
DB search
MQLVIVESPAKAKTIEKYLGSDFKVLASYGHVRDLPPKDGSVRPDEDFAMDWELYRDKQK
RFKEIADAAKDATRLILATDPDREGEAISWHVQELLKKRKALPTKVDRVTFNAITKAAVT
EAMKSPRELDQPLIDAYLARRALDYLFGFTLSPVLWRKLPGAKSAGRVQSVALRLICERE
HEIEIFKPEEYWSVLAKMEQDGTEFDARLVKFDGKKLDKMTLGNEGSAMAAKTAVEGARF
MVEDIETKPLKRNPSPPFTTSTLQQEAARKLGFSANHTMRCAQSLYEAGAITYMRTDGVQ
MDPGAIHALRDAIGDRYDKAYLPEKPRFYSTKAKNAQEAHEAIRPTDFRRDQAGSGDEAK
LYDLIFKRAMASQMAAAQLERTTVTMRDPSGQHQLRATGQVVKFPGFFAVYQEGFDDKSE
DDDDGMLPVIRKGDSPLKKAVEANQHFTQPPPRFSEASLVKRLEELGIGRPSTYASTIQT
LRDRDYVRMEKNRFFAEESGRLLTAFLERFFPNYVAYDFTAGMEDELDTVSDGREEYKEL
LSKFWKDFKPKTEEVMEKLPSEVTEALDDYLSDFLFPEREDGESQRMCPMCRDEGRENGR
LALRGGRFGAFIACANYPECKYTRRFAQPGGQGDGGAEDGVMGTDPDSGAEVHRKTGRFG
PYVEMEVDGEKKRASIPKDLDDFDLEWAIKLLGLPRIVGAHPETGKEIEAAIGRYGPYLR
HDGKYGKLQSTRDVFDIGMNAAVTILAEAANRKGGGRGNAEPIKTLGEHPTSGGEIKVMP
GRYGPYVTDGNVNATIPKDIKPEDIEAAKAIELIDARAAKGPAKKKRKKAPAKKKAPAKK
TAAAKK
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttgttatcgttgagtcgcccgcgaaggcgaagacaatcgagaaatacctcgga
tcagacttcaaggttctggccagctatggtcacgtccgcgatctgccgcccaaggatggc
agcgtgcgcccggacgaagatttcgcgatggattgggaactctatcgtgacaagcagaag
cgtttcaaggaaatcgccgatgcggcgaaagatgcaacccggctcattctcgccactgac
cctgaccgcgaaggcgaagcgatcagctggcacgttcaggaactgctgaagaagcgcaag
gcgctgcccaccaaggtagaccgcgtcacattcaacgcgatcaccaaagcggctgtgacc
gaagcaatgaagagcccgcgcgagctcgatcaaccgcttatcgatgcatatctggctcgc
cgcgcgctcgactatctgttcggtttcacgctcagcccggtgttatggcgcaaactgccc
ggcgcgaagagtgccgggcgagtgcaatcggttgcgctgcgtctgatctgcgagcgcgag
cacgagatcgagatattcaagccagaggaatattggtccgtccttgccaagatggagcag
gacggcaccgaatttgatgcccggttggtcaagttcgacggcaagaagctcgacaagatg
acgctgggcaatgaaggcagcgcgatggcggccaagactgctgtcgagggtgcgcgtttt
atggtcgaggatatcgagaccaaaccgctcaagcgcaatccatcgccgccgttcaccaca
tcaaccttgcagcaggaggctgcgcgtaagctgggcttttccgccaaccacacgatgcgc
tgtgcgcagtcgctctatgaagcgggtgcgatcacctacatgcgtaccgatggcgtgcag
atggaccccggcgcgatccacgctttgcgtgatgcaatcggtgaccgctacgacaaggca
tatctccctgagaagcctcgtttctattccaccaaggccaagaacgcacaggaagcgcac
gaggcgattcgtccaaccgatttccgccgcgatcaagcgggttctggcgacgaggcgaag
ctttacgatctgattttcaagcgcgcgatggcaagccagatggccgctgcgcaacttgag
cggacaaccgtaactatgcgcgaccccagcggacagcatcaactgcgcgcgaccggacag
gttgtgaagttccccggcttttttgcggtctatcaggaaggctttgacgacaagtcggaa
gatgatgatgacggtatgttgcccgtcatccgcaagggcgacagcccgttgaaaaaggcg
gtggaagccaaccagcacttcactcagccgccgccgcgtttttctgaggcctcgcttgtc
aaacggcttgaagagttgggcattggccgtccgtctacctatgcctcgaccattcagacg
ctgcgtgatcgcgattatgtgcgaatggagaaaaaccgtttctttgcagaggaatctggc
cgtcttctgacagcatttctggagcgattcttccccaattatgtcgcctatgattttacc
gcaggtatggaagacgaactcgacacggtctcggacggacgcgaagagtacaaagaactg
ctgagcaaattctggaaggacttcaaacccaaaaccgaagaggtgatggagaagttgcct
tcggaagtgaccgaagctcttgacgattacttgtctgactttctcttccctgagcgcgag
gatggcgaaagtcagcgtatgtgccccatgtgccgggacgaagggcgcgagaatggccgc
ctggcgctgcgcggtggccgtttcggcgcgttcattgcctgtgccaactatcccgaatgc
aaatacacccgccgctttgcgcagccaggtgggcagggtgacggcggcgctgaagacggt
gtcatgggaaccgatccggacagcggcgcagaggtgcatcgcaagacagggcgctttggt
ccttatgtcgagatggaagttgacggggagaaaaagcgcgcctcaattccgaaggatctg
gatgacttcgatctggagtgggcgatcaagctgcttggcctgccacgcatcgttggagcg
cacccggaaaccggcaaggaaatcgaagctgcgattgggcgctatggcccttatcttcgc
catgatggtaaatacggcaagctccagagcacgcgcgatgtgtttgatattggcatgaat
gccgcggtcacaatcctggcggaagcggccaatcgcaagggcggcgggcgcggcaacgct
gaaccgatcaagacgctgggtgagcacccgacctctggcggcgagataaaggtcatgcca
ggtcgttatggcccatacgtcaccgatggaaatgtcaacgcgactattcccaaggatatc
aagccggaagacatcgaagcggccaaggccatcgagctgattgacgcgcgtgcggccaag
gggccggcgaagaaaaagcgcaagaaggccccggccaagaagaaggctcctgcgaagaag
acagcagcagcgaaaaagtaa
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