Achromobacter ruhlandii: AruCF_3558
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Entry
AruCF_3558 CDS
T11830
Name
(GenBank) DNA-directed RNA polymerase sigma24-like subunit
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
aruh Achromobacter ruhlandii
Pathway
aruh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
aruh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AruCF_3558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aruh03021
]
AruCF_3558
Transcription machinery [BR:
aruh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AruCF_3558
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
PhyR_sigma-like
Sigma70_ECF
HTH_23
HTH_28
HTH_24
HTH_31
HTH_Tnp_4
HTH_38
HTH_11
HTH_3
GerE
PCI
TnsD
HTH_40
Rv2175c_wHTH
HTH_AsnC-type
HTH_VMAP-M9
HTH_SB
Motif
Other DBs
NCBI-ProteinID:
AOU94449
LinkDB
All DBs
Position
3964355..3964834
Genome browser
AA seq
159 aa
AA seq
DB search
MLYGDHHGWLRGWLRKRLGNAFDAADLAHDTYVRILASGATPQPDQSRRHLTQIANGLLI
DLYRRRGIEAAYLEAIAALPVALAPSEEVRALAVEALIEVDTILHKLPPKARMALLLCKL
DGLSYREIAERLHVSVSSVEKYVAAALLACYQALYDGAH
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
gtgctttacggtgaccaccacggctggctgcgcggctggttgcgcaagcggctgggcaac
gccttcgacgccgccgacctggcgcacgacacctacgtccgcatcctggcctccggcgcc
acgccgcagccggaccagtcccgccgccacctgacccagatcgccaacggcctgctgatc
gacctgtatcgccgccgcggcatcgaagccgcctacctcgaggccatcgccgcgctgccg
gtggcgctggcgccgtccgaggaagtccgcgccctggcggtcgaggccctgatcgaagtc
gacaccatcctgcacaagctgccgcccaaggcccgcatggcgctgctgctgtgcaagctc
gacggcctgagctaccgcgagatcgccgaacggctgcacgtgtccgtctcctcggtcgag
aagtacgtcgcggcggcgctgctggcgtgctaccaggccctctacgatggcgcgcactga
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integrated database retrieval system
