KEGG   Achromobacter ruhlandii: AruCF_4085
Entry
AruCF_4085        CDS       T11830                                 
Symbol
fecI4
Name
(GenBank) RNA polymerase sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
aruh  Achromobacter ruhlandii
Pathway
aruh02020  Two-component system
Brite
KEGG Orthology (KO) [BR:aruh00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AruCF_4085 (fecI4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aruh03021]
    AruCF_4085 (fecI4)
Transcription machinery [BR:aruh03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AruCF_4085 (fecI4)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 HTH_23 Sigma70_ECF HTH_11 Sigma70_r4 PhyR_sigma-like GerE HTH_24 HTH_29 HTH_17 HTH_Tnp_ISL3 DUF6031 HTH_Tnp_4 Rv2175c_wHTH MerR HTH_IclR
Other DBs
NCBI-ProteinID: AOU94976
LinkDB
Position
complement(4533325..4533861)
AA seq 178 aa
MIKKVREPTVSNLALASGDAVHLLYRAHHGWLHNWLRGKLGNSCDAADLAQDTFLRVLRH
RQELDALREPRAYLTTIAKRLLLNHHRRRSLELAYLEALAALPEAQAPSPEQRLLILETL
QEIDEMLAGLARPARQAFLMAQIEGLSHTEIAARLNVSTRSVHRYIAKGYEQCILAVM
NT seq 537 nt   +upstreamnt  +downstreamnt
gtgatcaagaaagttcgggagcccaccgtgtccaaccttgcgctagcctccggcgatgcc
gtccatctgctttaccgcgcgcaccacggatggctgcacaactggttgcggggcaagctg
ggcaattcctgcgacgccgccgatctggcccaggacaccttcctgcgcgtgctgcgccat
cgccaggaactcgacgcgctgcgcgaaccgcgcgcctacctgaccaccatcgccaagcgc
ctgctgctgaaccaccatcggcgccgttcgcttgaactcgcctacctggaggcgctggcc
gccttgcccgaggcgcaggcgccatcgcccgagcaacgcctgctcatcctcgaaacattg
caggaaatcgacgagatgctggccggcctggcgcggccggcgcggcaggcgttcctgatg
gcgcagatcgaaggcctcagccacaccgagatcgccgcgcggttgaatgtgtcgacgcgc
tcggtgcatcgctacattgccaagggatacgaacaatgcatcctggcggtgatgtga

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