KEGG   Achromobacter ruhlandii: AruCF_4913
Entry
AruCF_4913        CDS       T11830                                 
Symbol
fecI6
Name
(GenBank) RNA polymerase sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
aruh  Achromobacter ruhlandii
Pathway
aruh02020  Two-component system
Brite
KEGG Orthology (KO) [BR:aruh00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AruCF_4913 (fecI6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aruh03021]
    AruCF_4913 (fecI6)
Transcription machinery [BR:aruh03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AruCF_4913 (fecI6)
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_23 PhyR_sigma-like HTH_28 HTH_24 HTH_20 HTH_11 HTH_38 HTH_36 HTH_7 HTH_40 Sigma70_r3 RRG8 HTH_31 TnsD
Other DBs
NCBI-ProteinID: AOU95804
UniProt: A0A1D8IH99
LinkDB
Position
complement(5441978..5442505)
AA seq 175 aa
MSSTESLEHRELGRLYRDHHGWLRGWLLRRLNVPAEAADLAQDTFLRLLASPASMAQLQG
VRQPRSFLATVAQRTLVDHIRRQVLERAWLETLAQQPEASAISPETRAILLETIREIDAM
LHGLGDKVRRAFLMSQLEGASYAEIAARLGVTVSSIKKYMARATEHCLVYALARQ
NT seq 528 nt   +upstreamnt  +downstreamnt
atgtcgtccacggaatccctggagcaccgcgagctgggcaggctctatcgcgaccatcac
ggctggctgcgcggctggctgctgcggcgcctgaacgtgccggccgaggccgccgacctg
gcccaggacaccttcctgcggctgctggcctcgccggcgtcgatggcgcaattgcagggc
gtgcggcagccgcgcagcttcctggccacggtggcgcagcgcacgctggtcgaccacatc
cgccgccaggtgctcgaacgcgcctggctcgaaaccctggcgcagcagcccgaggccagc
gccatatcgcccgagacccgggccatcctgctcgagaccatccgcgagatcgacgccatg
ctgcacggcctgggcgacaaggtgcggcgcgccttcctgatgtcccagctggaaggggcc
agctacgccgagatcgccgcccgcctgggtgtgacggtcagctccatcaagaagtacatg
gcgcgcgccaccgagcattgcctggtgtacgcgctggcccggcagtag

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