Agrobacterium rubi: G6M88_00365
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Entry
G6M88_00365 CDS
T08058
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
arui
Agrobacterium rubi
Pathway
arui00541
Biosynthesis of various nucleotide sugars
arui01100
Metabolic pathways
arui01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
arui00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
G6M88_00365 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
arui01005
]
G6M88_00365 (kdsA)
Enzymes [BR:
arui01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
G6M88_00365 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
arui01005
]
Lipid A
G6M88_00365 (kdsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
QTF98956
UniProt:
A0AAE7R4S9
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All DBs
Position
1:77659..78507
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AA seq
282 aa
AA seq
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MSVQNNLEVVVGEGAGQVTFSNTKRFSLIAGPCQMESRDHAFMIAENLAELCGKLGLGLV
YKSSYDKANRTSLSGQRGIGIDKALEVFAELKQQFGFPVLSDIHTEEQCATVAPIIDILQ
IPAFLSRQTDLLVAAAKTGRVINVKKGQFLAPWDMKNVLAKLNDSGNPNVLLCERGASFG
YNTLVSDMRSLPIMASLGAPVVFDATHSVQQPGGQGGSTGGQREFVETLSRAAVAVGIAG
LFVETHEDPDNAPSDGPNMVHLKDMPKLLEKLLAFDDIAKSV
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttcagaacaatcttgaggtggtcgtcggcgaaggtgccggacaggtcaccttt
tccaacacgaaacgattctcgctgatcgctggcccctgccagatggaaagccgagaccac
gccttcatgattgccgaaaacctggctgagctttgcggcaagctggggctgggtctggtc
tacaagtcgtcttacgacaaggccaaccgcacctctctttccggccagcgcggaatcggc
atagacaaggcgctggaggtctttgcggagttgaagcagcagttcggctttccggttctc
tccgatattcacacggaagagcagtgcgccaccgtcgcgcctatcatcgacattctgcaa
atcccggctttccttagccgtcagacagaccttctcgttgcggccgccaagaccggtcgc
gtgatcaacgtcaagaagggacagttcctggcgccttgggatatgaagaacgtgctggcc
aagctgaacgacagcggcaatccaaacgttctgttgtgcgaacgcggtgcgtccttcggt
tacaacacgcttgtctccgacatgcgctctttgcccatcatggcgtcgctaggcgcgcca
gtcgtgttcgatgcgacccattcggttcagcagccaggcgggcagggcggttccacgggt
ggtcagcgtgaatttgttgaaacactgtcgcgggcggctgtcgcggtcggtattgccggt
ctgttcgtggaaacgcatgaagacccagacaatgcgccgtctgacggccccaacatggtt
catctgaaggatatgccgaagcttctggaaaagctgctggcctttgacgatatcgccaaa
tcggtgtga
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