Agrobacterium rubi: G6M88_02135
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Entry
G6M88_02135 CDS
T08058
Symbol
glgX
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
arui
Agrobacterium rubi
Pathway
arui00500
Starch and sucrose metabolism
arui01100
Metabolic pathways
arui01110
Biosynthesis of secondary metabolites
Module
arui_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:
arui00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
G6M88_02135 (glgX)
Enzymes [BR:
arui01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
G6M88_02135 (glgX)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
pulA_all-beta
Motif
Other DBs
NCBI-ProteinID:
QTF99272
UniProt:
A0AAE7ULW8
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All DBs
Position
1:439238..441313
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AA seq
691 aa
AA seq
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MAQFGSSILPGDFTRLGANFDGDGVNFAIFSAHAERIELCLFDESGKNEIERITLPEFTN
EIWHGFIPGLKPGALYGYRVHGPYDPENGHRFNPNKLLVDPYARELVGDIEWGPEQFGYI
LDAEDKDLSFNDSDSAAKMPKCRVIDPADYDWSSDKKPNVPWSKTIFYETHVKGFTQLHP
GIAENLRGTYEGLGDKQIVDYMKSLGITSVELLPIHSFPDDSHLLDKGLKNFWGYNSLGF
FSPASRYYGPKGMAGFRDMVRAFHDGGIEVILDVVYNHTAEGNELGPTLSFKGIDNFSYY
RTLPDQPRYYINDTGTGNTVNTSHPRVLQMVTDSLRYWAEDMHIDGFRFDLGTILGREPE
GFDQRSGFFDAVGQDPVLSKLKLVGEPWDIGPGGYQVGGFPPGWAEWNDKYRDTVRDYWK
DEDGTAGDFAARVLGSGDVYDLRGRRPWSSVNFITAHDGFTLNDLVSYDEKHNEANGEDN
KDGHDHNRSYNYGVEGPTDDEGIIAVRDRQKRNFLATLLLSHGTPMLLAGDEFGRSQMGN
NNGYCQDSELSWVHWENLPNSAETLRKFTAKLIELRQNHSVLRRDSWRDGTHITWLNPGG
GEQTQAQWEDPGSTSLGLRLSQDDNGDAEEWRDVLILFNPHDGIVEFKLPDAEHGWMTEL
TTADPEANADKIANGETYSVEGRTLVVLRAA
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcccagttcggttccagcattttgcccggcgacttcacccgccttggcgcgaatttc
gacggtgatggtgtcaatttcgcgatcttcagcgcccacgcagaacgcatcgaattgtgc
ctcttcgacgagagcggcaaaaacgaaatcgagcgcattacgcttccggaatttaccaac
gaaatctggcacggctttattcccggcctgaagcccggcgcgctttatggctatcgtgtt
cacggcccctatgacccggagaacggtcaccgcttcaaccccaacaagctgctggtcgat
ccttacgcccgcgaactcgtcggcgatatcgaatggggaccggaacagttcggttacatt
ctggatgcggaagataaggacctgtccttcaacgacagcgacagtgccgccaagatgccg
aagtgccgcgtgatcgatcccgcggattacgactggtcgagcgacaagaagccgaacgtg
ccttggtcgaagacaattttctatgaaacacacgtcaagggcttcacgcagcttcacccc
ggcatcgctgaaaatctgcgcggcacctatgagggcctcggcgacaagcagatcgtcgat
tacatgaaaagcctcggcatcacctccgtcgagcttctacccatccattccttccccgac
gattcgcatctgctggataaaggcctgaagaatttctggggctataactcactcggtttc
ttctcgcctgcttcgcgctattacggccccaagggcatggctggtttccgtgatatggtg
cgcgcgttccacgatggtgggatcgaggtcattcttgacgtggtctataaccacaccgcc
gaaggcaacgagcttgggccgaccctgtcgttcaagggcatcgacaacttctcctactac
cgcaccctgcccgaccagccgcgttactacatcaatgacaccggcaccggaaacaccgtc
aacacctcgcacccgcgcgtgctgcagatggtgacggactcgctgcgctactgggccgaa
gacatgcatatcgatggcttccgcttcgatttgggcaccattctcggccgcgagccggaa
ggtttcgaccagcgcagcggtttcttcgatgccgtcggccaggaccctgttctgtccaag
ctgaagctggtgggtgaaccttgggatatcggccccggcggctatcaggtcggcggcttc
cctcccggttgggcagagtggaacgacaagtaccgcgacaccgtgcgcgactactggaag
gacgaagacggcaccgccggtgatttcgccgctcgcgttctcggttccggcgatgtttac
gatctgcgtggccgtcggccttggtcaagtgtcaacttcatcacagcgcatgacggcttc
acgctgaacgacctcgtatcctacgacgagaagcacaacgaggcgaacggcgaagacaac
aaggacggccacgaccataaccgcagctacaactacggtgtggaaggcccgaccgacgac
gaaggcattattgcggtgcgcgaccgccagaagcgcaacttcctcgccaccctcctcctc
tcccacggcacaccgatgctgctggccggtgacgagtttggtcgtagccaaatgggcaac
aacaatggctattgccaggacagcgaactgagctgggtgcattgggaaaatctgcccaac
agcgcagaaacgctccgcaagttcaccgccaagctgatcgaactgcgtcagaaccactcc
gttctacgccgcgacagctggcgcgacggcacgcacatcacatggctgaacccaggcggt
ggtgagcagacgcaggcgcagtgggaagatccgggcagcacatcgctgggcttacgtttg
tcgcaggatgacaacggcgacgcggaggaatggcgcgatgtgctgatcctcttcaaccca
catgatggcatcgtggaattcaagctgccggacgccgagcacggctggatgacggaactg
acgaccgccgatcctgaggcaaatgccgacaagatcgccaatggcgagacttattcggtc
gaaggccgcacgctggtcgtgctgcgcgccgcctga
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