Agrobacterium rubi: G6M88_02600
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Entry
G6M88_02600 CDS
T08058
Name
(GenBank) murein L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
arui
Agrobacterium rubi
Brite
KEGG Orthology (KO) [BR:
arui00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
arui01002
]
G6M88_02600
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
arui01011
]
G6M88_02600
Peptidases and inhibitors [BR:
arui01002
]
Cysteine peptidases
Family C82
G6M88_02600
Peptidoglycan biosynthesis and degradation proteins [BR:
arui01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
G6M88_02600
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QTF99357
UniProt:
A0AAE7QZ79
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All DBs
Position
1:complement(529066..530397)
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AA seq
443 aa
AA seq
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MTKKIVPEVVSRRAMLRSAVSLGAVALAAPAFAQDAFNDLIGSSRRGNWDDQFDANSSRA
TANVASNIPVLSPESPAYVQQAVMQYQQIVSNGGWPDVPSSQQKLQIGVSDPSVQALRQR
LMISGDLPREAGISSAFDSYVDGALKRFQARHGLPADGVIGEYTLKALNVSAQIRLGQLQ
TNLVRINTMSGDLGPRHVMVNIPAASIEAVENNRVVLRNTAVVGRDTRPTHIINSKIYEI
ILNPYWTAPRSIIEKDIVPLMQKDPTYLERNNIRLLDGRGQEVSPTTIDWNAPKAPNLMF
RQDPGKNNAMSSTKINFHNPNNEYMHDTPQQGLFNKLMRFESSGCVRVQNVRDLTSWMLR
DTPGWSRQEIERVIATRVNTPIKLAQEIPVYFVYITAWSTRDGVVQFRDDIYSKDGNAEL
ALNTTTAMEQPSGSIDDDLVPRN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagaaaatcgtccccgaagttgtttcacggcgcgccatgttgcgctctgccgtt
tcccttggcgctgtggctctggccgcgcccgcatttgcgcaggacgcgttcaacgatctg
atcggatcgtcgcgtcgaggcaactgggacgatcagttcgatgccaactcgtcgcgcgca
acggcgaatgttgcatccaacatccctgttctcagccctgaatctcctgcctatgtgcag
caggccgtgatgcagtatcagcagatcgtctcgaatggcggttggcccgacgttccttcg
agccagcaaaagctgcagatcggtgtcagcgatccctccgtgcaggctttgcgccagcgt
ttgatgatttctggcgacctgccgcgtgaagccggtatttccagcgcgttcgattcatat
gtggatggtgccttgaagcgcttccaggcgcgccacggccttccggctgatggcgttatc
ggtgaatacacattgaaggcgctgaatgtttcggcgcagattcgtctgggacaacttcag
accaacctcgttcgcatcaacacgatgtcgggcgatcttggcccgcgccacgtgatggtc
aatattccggcggcctctattgaggcggtcgagaacaaccgcgtcgtgctgcgcaatacg
gccgtcgtcggccgcgatacgcgcccgacgcacatcatcaactccaagatttacgagatc
attctcaacccttactggacggctccgcgttctatcatcgaaaaggacatcgttcctttg
atgcagaaggacccgacctatctggagcgcaataatatccgtcttctggatggccgtggg
caggaagtgtcgcctacgacgatcgactggaacgcgccgaaggctccgaacctcatgttc
cgtcaggatccgggcaagaacaacgccatgtcctcgaccaagatcaacttccacaacccg
aacaacgagtacatgcacgacacgccgcagcagggcctgttcaacaagctgatgcgcttt
gagtcgtccggctgtgttcgcgtgcagaacgttcgcgacctgacatcgtggatgctgcgt
gacacgcccggctggtcgcgtcaggaaatcgaacgggtcatcgccacccgcgtcaacacg
ccgatcaagctggcgcaggaaattccggtgtatttcgtttacatcacggcatggtcgaca
cgcgatggcgtcgtgcagttccgcgacgacatctacagcaaggacggcaatgccgaactg
gcgctgaacacgacaacggccatggaacagccttcgggctccatcgacgacgacctcgtg
ccgcgcaactga
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