KEGG   Agrobacterium rubi: G6M88_02945
Entry
G6M88_02945       CDS       T08058                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
arui  Agrobacterium rubi
Pathway
arui03030  DNA replication
arui03430  Mismatch repair
arui03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:arui00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    G6M88_02945
   03430 Mismatch repair
    G6M88_02945
   03440 Homologous recombination
    G6M88_02945
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:arui03032]
    G6M88_02945
   03400 DNA repair and recombination proteins [BR:arui03400]
    G6M88_02945
Enzymes [BR:arui01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     G6M88_02945
DNA replication proteins [BR:arui03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     G6M88_02945
DNA repair and recombination proteins [BR:arui03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     G6M88_02945
SSDB
Motif
Pfam: RNase_T Rv2179c-like AAA_8
Other DBs
NCBI-ProteinID: QTF99420
UniProt: A0AAE7R6H8
LinkDB
Position
1:complement(598572..599162)
AA seq 196 aa
MKTIAIDFETANEERGSACAVGLAWIEDGRIVRVEERLIRPRDMRFSPFNVAIHGIKPGD
VEDAPEFPEVMDEFIDDLRDSTMIAHNAAFDFSVMRASFDKYRQSYPSLSYFCSVKMSQR
VWPSLPSHKLNIIAHHLQLRFVHHNAAEDAVVCAAASIAAAKALAVEHIHHIPEKIGMVT
GRLHATGYAPCTMRKR
NT seq 591 nt   +upstreamnt  +downstreamnt
ttgaagaccatcgccatcgatttcgaaaccgccaatgaagaacggggcagcgcctgcgcc
gtcggattggcgtggatcgaggatggtcggatcgtaagggtagaagagcggttgatccgc
ccgagggatatgcggttttcgccgttcaatgtggcgatccacggcatcaaacccggcgat
gtggaagatgcgccggaatttcccgaggtgatggacgagttcatcgatgatctccgcgat
tcgacgatgattgcccacaatgcggccttcgatttcagcgtcatgcgtgcgagtttcgac
aaatatcgccagagctatccgtcgctgtcctatttttgcagcgtgaagatgtctcagcgc
gtctggccgtcgctgccatcgcacaagctcaacatcattgctcaccatctgcaattgcgt
ttcgtgcaccacaatgctgccgaagatgcggttgtgtgtgcggcggcatcgattgcggcg
gccaaagcgcttgcggtcgagcacatccaccacatcccagaaaagatcggtatggtgacc
gggcgactgcatgcaaccggttatgcaccctgcaccatgagaaaacgctga

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