Agrobacterium rubi: G6M88_02945
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Entry
G6M88_02945 CDS
T08058
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
arui
Agrobacterium rubi
Pathway
arui03030
DNA replication
arui03430
Mismatch repair
arui03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
arui00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G6M88_02945
03430 Mismatch repair
G6M88_02945
03440 Homologous recombination
G6M88_02945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arui03032
]
G6M88_02945
03400 DNA repair and recombination proteins [BR:
arui03400
]
G6M88_02945
Enzymes [BR:
arui01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G6M88_02945
DNA replication proteins [BR:
arui03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
G6M88_02945
DNA repair and recombination proteins [BR:
arui03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
G6M88_02945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
AAA_8
Motif
Other DBs
NCBI-ProteinID:
QTF99420
UniProt:
A0AAE7R6H8
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All DBs
Position
1:complement(598572..599162)
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AA seq
196 aa
AA seq
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MKTIAIDFETANEERGSACAVGLAWIEDGRIVRVEERLIRPRDMRFSPFNVAIHGIKPGD
VEDAPEFPEVMDEFIDDLRDSTMIAHNAAFDFSVMRASFDKYRQSYPSLSYFCSVKMSQR
VWPSLPSHKLNIIAHHLQLRFVHHNAAEDAVVCAAASIAAAKALAVEHIHHIPEKIGMVT
GRLHATGYAPCTMRKR
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaccatcgccatcgatttcgaaaccgccaatgaagaacggggcagcgcctgcgcc
gtcggattggcgtggatcgaggatggtcggatcgtaagggtagaagagcggttgatccgc
ccgagggatatgcggttttcgccgttcaatgtggcgatccacggcatcaaacccggcgat
gtggaagatgcgccggaatttcccgaggtgatggacgagttcatcgatgatctccgcgat
tcgacgatgattgcccacaatgcggccttcgatttcagcgtcatgcgtgcgagtttcgac
aaatatcgccagagctatccgtcgctgtcctatttttgcagcgtgaagatgtctcagcgc
gtctggccgtcgctgccatcgcacaagctcaacatcattgctcaccatctgcaattgcgt
ttcgtgcaccacaatgctgccgaagatgcggttgtgtgtgcggcggcatcgattgcggcg
gccaaagcgcttgcggtcgagcacatccaccacatcccagaaaagatcggtatggtgacc
gggcgactgcatgcaaccggttatgcaccctgcaccatgagaaaacgctga
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