KEGG   Agrobacterium rubi: G6M88_03160
Entry
G6M88_03160       CDS       T08058                                 
Name
(GenBank) HAMP domain-containing protein
  KO
K03406  methyl-accepting chemotaxis protein
Organism
arui  Agrobacterium rubi
Pathway
arui02020  Two-component system
arui02030  Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:arui00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    G6M88_03160
 09140 Cellular Processes
  09142 Cell motility
   02030 Bacterial chemotaxis
    G6M88_03160
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:arui02035]
    G6M88_03160
Bacterial motility proteins [BR:arui02035]
 Flagellar system
  Chemotaxis proteins
   MCPs
    G6M88_03160
SSDB
Motif
Pfam: MCPsignal NIT HAMP DUF1664 BLOC1_2 ATG17_like DUF3135
Other DBs
NCBI-ProteinID: QTF99461
UniProt: A0AAE7R4J3
LinkDB
Position
1:complement(649142..651325)
AA seq 727 aa
MKLVDIPISKRLWAAVILPMLGAGYLCYVQISERLGDYHNMNEVVVIGDQLKKLSSIAHA
LQVERGMTAGFIGSKGTKQASELASARKNTDAVLNDFPALSAALNDLTGGASTAQQAAAE
DSLAAAVSIRGAVDSLTTTGGVAFAAYTSAVSTIITIADDLSVETGNPDVSSRIAAFAEL
MHAKEIAGQERGLANGFIAAKRMDPARFAEFASMAGGQQVLIDAFLSEQNATLQKSAATL
IDDVSSAVVDFRAKLLANGGNADLSGLDSAAWFAAATKRIEALKQIENQTIDDISALAKQ
NASAAFNTLVLMIAITLVCAVLMIAFSTVMAMTVVRPIRQIVKAMGRLAAGQVDDADVSS
GRRDEIGEMEQAVEVFRQAAIRNRKLEAAEADNRMRAEQQRVDMQRAADADAEARLVQAT
STFAASMKKLAAGDMLCEMNDPLASQFEALRHDFNSAVRQLRDTLTGVGQSVATVTGGSQ
EVSSASDHLSRRTEQQAASLEETAAALDQITANVSSTSKRTEEARAVVRDARQKAGNSSE
VVKNAVAAMDRIEDSSKQISQIIGVIDEIAFQTNLLALNAGVEAARAGEAGKGFAVVAQE
VREPAQRSAKAAKEIKQLIGNSALAVSEGVRLVNDTGSGLSEIAQLVQSVNAHMEAIATA
AQEQSAGLVEVNNAVNTMDQTTQQNAAMVEEMNAAGASLAQESAKLNGLLSNFQLGHESA
RQVFRAA
NT seq 2184 nt   +upstreamnt  +downstreamnt
atgaaactcgtcgatatccccatcagcaaaaggctttgggccgctgttattcttcccatg
cttggcgcgggctatctgtgttatgtgcagatatccgagcgcctcggtgactatcacaat
atgaacgaggtcgtggttatcggcgaccagctcaaaaagttgagcagcatcgcccatgcg
cttcaggtagagcgtggcatgacggcagggttcatcggctccaaaggcacgaaacaggca
agcgaacttgcatccgcgcgcaagaacaccgatgcggttctgaatgattttcctgccctg
tcggcggcgttaaacgacctgacggggggcgcctcgaccgcccagcaagccgcagcagaa
gacagtctggcggctgccgtcagcatccgcggcgccgtcgacagcctgacgacgaccgga
ggggtcgcctttgcggcctacacatctgccgtttccaccatcatcaccattgccgatgat
ctttctgtcgagaccggtaatcccgacgtctccagccgcattgcggcctttgccgagttg
atgcacgcaaaggaaatcgcggggcaggagcggggtctcgccaatggcttcattgcggca
aagcgcatggacccggcccgttttgcggagtttgcatccatggccggtggtcagcaggtg
ctgatcgacgcctttctctcagagcagaatgccaccttgcagaaaagtgctgccaccctc
atcgacgatgtgtcgagcgccgtcgtggatttccgcgcaaaacttctggccaatggtggc
aatgcagatctcagtgggctcgatagcgccgcctggtttgcggcggcgacgaaacgcatc
gaggcgttgaagcagatcgaaaaccagaccatcgacgacatttccgctctggcaaagcag
aatgcgagtgcggcgttcaacacgctcgttctcatgatcgccattacccttgtctgcgcg
gttctcatgattgctttttccacggtgatggcaatgacggtcgtgcgacccattcgtcag
atcgtcaaagctatgggtcgtcttgcggcggggcaggtggatgacgcagatgtttcgtct
ggccgacgcgacgagatcggcgagatggagcaggcggttgaagtgttccgccaggcggcc
attcgcaatcgaaagctcgaagccgccgaggcggataaccgcatgcgggccgaacagcag
cgggtggacatgcaacgggcggctgacgccgatgccgaagcccgccttgtgcaggcaacg
agcacctttgccgccagcatgaagaaactcgcagcgggcgacatgttgtgcgaaatgaac
gatcccttggcgtcgcagttcgaggccttgcgccatgatttcaacagcgcggttcgccag
ttgcgcgacacgttgacgggcgtcggccaatccgtggccaccgttaccggcggttcgcag
gaagtctcttccgcgtccgaccatctgtccagacgcaccgagcaacaggcggcgtcgctg
gaagaaaccgcagcggctttggaccagatcaccgccaacgtgtcctccacttcaaaaagg
acggaggaagcgcgcgccgtggttcgcgatgcacgccagaaagcgggcaattccagcgag
gtcgttaaaaacgcggtcgctgccatggacaggatcgaggattcatcgaaacagatcagc
cagatcatcggcgtaatcgatgaaattgccttccagacgaacctcttggcgctgaatgcc
ggtgtggaagcggcacgtgccggggaggcgggcaagggctttgcagtcgttgcgcaggag
gtccgtgaacctgcccagcgctcggccaaggcggccaaggaaatcaagcagttgatcggc
aattctgcgcttgccgtcagcgagggcgttcgcctcgtcaacgataccggctcgggcctg
tccgaaatcgcgcaacttgtccaatcggtcaatgcgcatatggaagcgatcgccaccgcg
gctcaggagcagtcagccggacttgtggaggtcaataatgccgtcaacaccatggatcag
accacgcagcagaacgcagcgatggtggaagagatgaatgccgccggtgcctcgcttgcc
caggagagcgccaagctgaacgggcttctgtcgaacttccagctgggtcacgagagtgcg
cggcaggtgttcagagcagcttaa

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