Agrobacterium rubi: G6M88_03440
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Entry
G6M88_03440 CDS
T08058
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
arui
Agrobacterium rubi
Pathway
arui00220
Arginine biosynthesis
arui00240
Pyrimidine metabolism
arui00250
Alanine, aspartate and glutamate metabolism
arui01100
Metabolic pathways
arui01110
Biosynthesis of secondary metabolites
arui01240
Biosynthesis of cofactors
Module
arui_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
arui00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
G6M88_03440 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
G6M88_03440 (carB)
00220 Arginine biosynthesis
G6M88_03440 (carB)
Enzymes [BR:
arui01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
G6M88_03440 (carB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATPgrasp_Ter
ATP-grasp_4
ATP-grasp_3
Dala_Dala_lig_C
ATP-grasp
CoA_binding_2
YopH_N
Motif
Other DBs
NCBI-ProteinID:
QTF99512
UniProt:
A0AAE7UM36
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All DBs
Position
1:713594..717079
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AA seq
1161 aa
AA seq
DB search
MPKREDIKSILIIGAGPIVIGQACEFDYSGTQACKALKEEGYRVILVNSNPATIMTDPGL
ADATYVEPITPEVVAKIIAKERPDALLPTMGGQTALNTALSLKRMGVLDRYNVEMIGAKP
EAIDMAEDRALFREAMKRIGLETPKSMLANATDIKDADRKTHEAARADLKAKLSGAELDK
ALDNLENQWNLGETDRKQRYISHAMAIAAQAIDVVGLPAIIRPSFTMGGTGGGIAYNRSE
FFEIIGGGLDASPTTEVLIEESVLGWKEYEMEVVRDKADNCIIICSIENIDPMGVHTGDS
ITVAPALTLTDKEYQMMRNASIAVLREIGVETGGSNVQFAVNPKDGRLVVIEMNPRVSRS
SALASKATGFPIAKVAAKLAVGYTLDELDNDITGGATPASFEPSIDYVVTKIPRFAFEKF
PGASPILTTAMKSVGEVMAIGRTFAESLQKALRGLETGLTGLDEIEIPGYEEGEGSKNAI
RAAIGTPTPDRLRMVAQALRMGMSEAEVHENSKIDPWFIAQFKAIVDMEARVREHGLPQD
AENLRSLKAMGFSDARLASLTKKRPKEVAELRNSLNVRPVFKRIDTCAAEFASPTAYMYS
TYETPFVGQLRSEAQVSDRKKVVILGGGPNRIGQGIEFDYCCCHAAFALKDAGFEAIMIN
CNPETVSTDYDTSDRLYFEPLTAEDVIEIMRAEQEKGELVGVIVQFGGQTPLKLAEALEK
NGIPILGTAPDMIDLAEDRDRFQKLLMKLDLNQPNNGIAYSVEQARLVASEIGFPLVVRP
SYVLGGRAMQIIHSEGQLQTYLLDTVPGLVPEDIKQRYPNDKTGQINTLLGKNPLLFDSY
LTNAVEVDVDALCDGENVFVSGIMEHIEEAGIHSGDSACSLPSRSLSEETLNELERQTTA
MAKALNVGGLMNVQYAIKDGTIYVLEVNPRASRTVPFVAKTIGAPIAKIAARIMTGEKLD
AAIAAYGAKPDPRNLKHIAVKEAVFPFARFPGVDILLGPEMRSTGEVIGLDTDFALAFAK
AQLGASVDLPRSGAVFVSVRDEDKERVLPAIRHLVEIGFKVLATGGTQRFLAEQGINAEK
INKVQEGRPHIEDAIRNRQVQLVINTTDSNKAISDSKSLRRATLMQKVPYYTTMSGAESA
ALAIKALKAGSLDVRPLQSYF
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagcgcgaagatatcaagtccatccttatcatcggcgcgggtccgattgtcatt
ggtcaggcatgcgagttcgattattccggcacacaggcctgcaaagcgctgaaagaggaa
ggctaccgggtcatcctcgtcaactccaaccccgccaccatcatgaccgaccccggtctg
gccgacgcgacctatgtcgagccgatcacgccggaagtcgtggccaagatcatcgccaag
gaacgcccggacgcgctgctgccaaccatgggcggccagacggcgctgaacacggcgctt
tctctcaagcgcatgggcgtgctggatcgctataatgtcgaaatgatcggcgcaaagcct
gaggccatcgacatggccgaagaccgcgccctgttccgcgaagccatgaagcgcattggt
ctcgaaacccccaagtcgatgctggccaacgccaccgacatcaaggatgccgaccgaaag
acgcatgaagccgcgcgcgccgacctgaaggcaaagctttcgggtgcagagctcgacaag
gcgctcgacaacctcgaaaaccagtggaacctaggcgagacggaccgcaagcagcgttac
atcagccacgccatggccattgccgcgcaggccatcgatgtcgtcggcctgccagccatc
atccgcccctcctttaccatgggcggcaccggcggcggcattgcctataaccgctcggaa
ttcttcgaaatcatcggcggcggtctggatgcctcccccaccaccgaagtgctgatcgaa
gaatcggttctcggctggaaggaatatgaaatggaagtggtccgcgacaaggcggacaac
tgcatcatcatctgctccatcgaaaacatcgacccgatgggcgtgcacaccggtgactcg
atcactgtcgcccctgccctgacgctgacggacaaagaataccagatgatgcgcaatgca
tcgatcgcggttctccgcgaaatcggcgtcgagaccggcggctcgaacgtgcagttcgcc
gtcaacccgaaggatggccgtctggtcgtcatcgaaatgaacccacgcgtgtcgcgctcg
tctgcgcttgcttccaaggccacgggcttcccgattgccaaggtcgcggccaagcttgct
gtcggctacacgctggacgagttggacaacgacatcaccggcggcgcgacgcctgcgtcc
ttcgaaccatccatcgactacgtcgtcaccaagatcccgcgcttcgccttcgagaaattc
ccaggcgcatcgccaattctgacgaccgccatgaagtcggtcggtgaagtcatggccatc
ggtcgtacctttgccgagtcgctccagaaggcgctgcgtggtctggaaaccggcctcacc
ggtctcgatgagatcgaaatacccggctacgaagaaggcgaaggctccaagaacgccatc
cgcgctgctatcggcacaccgacgccggatcgtttgcgtatggtcgcgcaggcccttcgc
atgggcatgtccgaggccgaagtgcatgaaaacagcaagatcgacccatggttcatcgcc
cagttcaaggccatcgtggacatggaagcccgcgtgcgcgagcacggcctgccacaagac
gctgaaaaccttcgctcgctcaaggccatgggcttctccgatgcccgcctcgccagcctg
accaagaagcgcccgaaggaagtcgcggaactacgcaacagcctcaatgttcgccccgtt
ttcaagcgcatcgacacctgcgctgccgaattcgcctcaccgaccgcctatatgtactcc
acctacgagacgccctttgtcggccagctgcgctccgaagcacaggtttccgaccgaaag
aaggtcgtcattctcggcggtggcccgaaccggatcggccagggcatcgagttcgattat
tgctgctgccacgccgccttcgctttgaaggatgcgggctttgaagccatcatgatcaac
tgcaacccggaaaccgtgtccaccgactatgacacctccgaccgcctctatttcgagcca
cttacggctgaagacgtgatcgagatcatgcgtgcggagcaggaaaagggcgagttggtc
ggcgttatcgtgcagttcggcggccagacaccgttgaagctggccgaagcgctcgagaag
aacggcattccgatcctcggcacagcgccagacatgattgaccttgccgaagaccgcgac
cgtttccagaagctgctaatgaagctcgatctcaaccagccgaacaacggcatcgcctat
tccgtcgagcaggcccgtttggtcgcctccgaaatcggcttcccgctggtcgtgcgcccg
tcctatgttctgggtggccgcgccatgcagatcatccattccgagggacagctccagacc
tatctactggacaccgttccgggtctggtgcccgaggatatcaagcagcgttaccccaac
gacaagaccggccagatcaacacgctgctgggcaagaacccgctgctgttcgatagctac
ctgaccaacgcggtcgaagtggacgtcgatgcattgtgcgatggcgagaatgtcttcgtc
tccggcattatggagcacatcgaagaagccggtattcactctggcgatagcgcctgctcg
ctgccatcccgttcgctgtccgaagagacattgaatgagttggagcgccagacgacggcc
atggccaaggcgttgaacgtcggtggcctgatgaacgtgcaatatgccatcaaggacggc
acgatctacgttctggaagtcaatccgcgcgcatcgcgtaccgtgccgtttgtcgccaag
accattggcgcaccgattgcaaagattgcagcccgcatcatgaccggcgaaaagctggat
gcggcgattgccgcttacggcgcaaagccggacccgcggaacctcaagcacatcgccgtc
aaggaggcagtcttcccgttcgcccgcttccccggcgtcgatattctgctgggaccagag
atgcgctccaccggtgaagtcatcggcctcgacacggatttcgcgctggccttcgccaag
gcgcagctgggcgccagcgtcgatctgcctcgctccggcgctgtgttcgtgtctgtccgc
gatgaagacaaggaacgggttctgcccgccatccgtcatctcgttgaaatcggcttcaag
gtcctggcaaccggcggcacgcagcgcttccttgccgaacagggcatcaatgccgagaag
atcaacaaggttcaggagggccgtccgcacatcgaagacgctatccgcaaccgtcaggtc
cagctggtcatcaacacgacggacagcaacaaggcgatctcggactcgaaatcgctgcgc
cgcgcgacgctgatgcagaaagtgccttattacacgacgatgtcaggtgctgaatccgca
gcgcttgccataaaggcgctcaaagccggcagcctcgacgtgcggcctctgcaaagctat
ttctga
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