Agrobacterium rubi: G6M88_05330
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Entry
G6M88_05330 CDS
T08058
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K11751
5'-nucleotidase / UDP-sugar diphosphatase [EC:
3.1.3.5
3.6.1.45
]
Organism
arui
Agrobacterium rubi
Pathway
arui00230
Purine metabolism
arui00240
Pyrimidine metabolism
arui00760
Nicotinate and nicotinamide metabolism
arui01100
Metabolic pathways
arui01110
Biosynthesis of secondary metabolites
arui01232
Nucleotide metabolism
Module
arui_M00958
Adenine ribonucleotide degradation, AMP => Urate
arui_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
arui00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
G6M88_05330
00240 Pyrimidine metabolism
G6M88_05330
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
G6M88_05330
Enzymes [BR:
arui01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.5 5'-nucleotidase
G6M88_05330
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.45 UDP-sugar diphosphatase
G6M88_05330
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
5_nucleotid_C
Metallophos
LysM
LysM2_NFP
PGA_cap
NadN_nucleosid_C
LysM2_CERK1_LYK3_4_5
New_glue
Motif
Other DBs
NCBI-ProteinID:
QTF99854
UniProt:
A0AAE7R071
LinkDB
All DBs
Position
1:1097000..1098949
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AA seq
649 aa
AA seq
DB search
MNRILRFGLMTASVVALSAGAALADYQLNILHINDLHSRIEAINKFDSTCSTAEADKKEC
FGGIARVKSAIDARRTELGANANILVLDAGDQFQGSLFYTQYKSGPVAEFMNGIGFDAMA
IGNHEFDDGPAELLKLINAVKFPIISGNTKIADGSELKDKFKGYIIKEMGGQKVAVVSVL
ATDTNETSSPGDKVTFENEIEYLKGAVKEIQDQGVNKIVVLSHVGYVKDQEIARSVDGID
VIVGGHSHTLLSSTDPKAAGPYPTLVKDPAGIDVPIVTAYAYSKYLGDLTVTFDDNGVVK
STSGAPKLLDASVTPDEAFTKRVAELAAPLEEMKQKEIGTSEAAIDGAREVCRVKECTMG
NLVSDALLDRVKDQGITIAIQNGGGLRASIDAGPVTMGEVLTVLPFQNSIATFQIKGVDL
VAALENGASQIEEGAGRFVQTAGLKYSFDRSKPAGSRIVSVEVKEGDAFIKLDPEKTYGV
VTNNYTRTGGDGFKTFATKAINPYDFGPSLEDAVAAYIGSHSPYKPYTDGRVMDVTPADY
VAPPKEAKPATPAAPAPATTAQAPAATTSAAPAPAATAPTTPAPATTTSAPATTPADAAK
YIVARGDSLWKIAAEKYGNGAEWKKIAEANALKRPNHIEVGEELNVPAQ
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggattttgagatttggcctgatgaccgcatcggtcgttgcgctttccgccggt
gcggccctggccgattaccaactcaatattctccacatcaatgatctgcattcgcgtatc
gaagcgatcaacaagttcgactccacctgctccacggctgaagccgacaagaaagaatgc
ttcggtggcatcgcccgcgtcaaaagcgccatcgacgcccgccgcacagagttgggtgcc
aacgccaacattctcgtgctggatgctggtgaccagtttcagggttcgctgttctacaca
caatataaaagcggccccgttgctgaattcatgaacggcatcggcttcgacgccatggcc
atcggcaaccacgaattcgatgacggcccggcagaactgctcaagctcatcaatgcggtc
aagttcccgatcatttccggcaacaccaagattgccgacggctccgagctgaaagacaag
ttcaagggctatatcatcaaggaaatgggcggccagaaggttgctgtcgtgtccgtgctg
gccacagacaccaatgaaacatcgtcccccggcgacaaggtcacgtttgaaaacgagatc
gagtatctgaagggtgccgtcaaggaaatccaggatcagggcgtcaacaagatcgtcgtg
ctctcgcatgtcggctacgtcaaggatcaggaaatcgcccgctcggtcgatggtatcgac
gtcatcgtcggcggacacagtcacacgctgctctccagcaccgacccgaaggctgcaggc
ccttacccgacgctggtcaaagaccccgctggcatcgatgttccgatcgtcacagcctat
gcctactccaaatatctcggcgatctgactgtcaccttcgacgataatggcgtggtcaag
tccaccagcggcgcaccgaagctgctcgacgcctccgtcacccctgacgaagccttcacc
aagcgcgtggccgaactggccgccccgctggaagagatgaagcagaaggaaatcggcacc
agcgaagccgccatcgatggcgcgcgtgaagtgtgccgcgtcaaggaatgcaccatgggc
aacctggtgtcggatgcgctgctcgaccgcgtgaaggaccagggcatcaccatcgccatc
cagaacggcggcggcttgcgcgcttccatcgacgccggtcctgtgaccatgggcgaagtg
ctgacggttctgccattccagaattccatcgcaaccttccagatcaagggcgtcgatctc
gtcgcagcgcttgaaaatggtgccagccagatcgaggaaggcgctggccgcttcgtgcag
acggcaggcctgaaatactccttcgaccgctccaagccagccggcagccgcatcgtctcc
gtcgaggtcaaggaaggcgacgccttcatcaagctcgaccctgaaaagacctatggcgtc
gtgaccaacaactacacccgcaccggcggcgatggcttcaagaccttcgccaccaaggcc
atcaatccctacgacttcggaccaagccttgaagatgccgtggccgcctatatcggttcg
cacagcccctacaagccttacaccgatggccgcgtgatggatgtaacgccagccgactac
gttgccccgccaaaggaagccaagccagcaacacctgcggcccctgcacctgcaacaacc
gcgcaggctccagccgcaacgacatctgcggctccggctccagccgcaacggcgccaacc
accccggcaccggcaaccacgacgtcggctcctgccacaacaccggcagacgctgcgaaa
tatatcgttgcccgcggtgactcgctgtggaaaatcgccgctgagaaatacggtaatggc
gcagagtggaagaagatcgccgaagccaacgcgctgaagcgtccaaaccacatcgaagtt
ggtgaagaactgaacgtaccggcacagtaa
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