Agrobacterium rubi: G6M88_06590
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Entry
G6M88_06590 CDS
T08058
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
arui
Agrobacterium rubi
Pathway
arui03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
arui00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
G6M88_06590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arui03400
]
G6M88_06590
Enzymes [BR:
arui01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G6M88_06590
DNA repair and recombination proteins [BR:
arui03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
G6M88_06590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
Zn_ribbon_6
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QTG00079
UniProt:
A0AAE7RA01
LinkDB
All DBs
Position
1:complement(1388637..1390868)
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AA seq
743 aa
AA seq
DB search
MAKDSTDLFGALFDQRKPASSEPVSAVPVLVPLPAPGPYSYAVPQDMVVEPGSVVQVPLG
PRQVIGVVWDKSDGSTVDPKKLRPITKTFDCPPMREEMRRFIDWVAAYTLSPPGLVARMA
LRAPAAFDPEPMIEGLRLTEARPERLTPARERVLELAAEGHAWTKTGLANAAGVSSSVIE
GLAKQGIFESVFLPAPAVVAEPDPDYTEPRLEGPQKQAASEILEDVKKGGFAVSLIDGVT
GSGKTEVYFEAVAETLRQGKQVLILLPEIALTASFLDRFQDRFGSKPAEWHSDLSPRMRE
KVWRQTVTGEVRVVAGARSALFLPFDNLGLIIVDEEHDPAYKQEDRVYYNARDMAVVRAR
IADFPVVLVSATPSVESQVNGTSGRYNTIHLHTRFGDAAMPDLHLVDMRRHPPERGGFLS
PVLLRGIAKTMEKGEQSLLFLNRRGYAPLTLCRVCGHRFQCPQCSSWLVEHRFRSQLQCH
QCGHNQPTPDHCPECGTFDHLAACGPGVERIAEEVEKHFPEARTIVLSSDLMGVKRLRLE
LEAIVKGEADIVIGTQLVAKGHNFPLMTLVGIVDADIGLANGDPRAAERTFQLLSQVTGR
AGRTGLKSHGLLQTYQPQHPVMQAIVSGDAAAFYEREVIEREKALLPPFGRLASVIISAD
TRAEAETHARGLRASAPPASGIMLLGPAEAPLALIRGRYRFRLLVHGKRNSDMQSFMRAM
LGSGPKERGSIHVQVDIDPQSFL
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagattcgaccgatctgttcggggcgctgtttgatcagcgcaagcccgcttcg
tctgagcctgtttcggctgtgcccgttctggtgcctttgccggcaccggggccgtatagt
tacgcggtgccgcaagacatggtggtcgagccgggttcggtggttcaggtgcccttgggt
ccacggcaggtcatcggcgtggtctgggataaaagcgatggatcgaccgtcgatccgaag
aagcttcgccccattacgaaaaccttcgattgcccgcccatgcgcgaggaaatgcgccgc
ttcatcgattgggtggcagcctatacgctgtcgccacccggtcttgtggcgcgcatggcg
ctgcgtgcgcctgcggctttcgatcccgaaccgatgatcgaagggttgcggctgacggaa
gcgcgaccggaacggctgacgcctgcgcgcgaacgggtgttggagcttgccgcagaaggt
cacgcctggaccaagaccgggcttgccaatgcggccggtgtttcttcaagcgtcatcgag
ggtctggccaagcaaggcattttcgaaagcgtcttcctgcctgcccccgctgtggtggcc
gagcctgaccccgattataccgagccccgtctcgaaggtccgcaaaagcaggccgcatct
gaaattcttgaagatgtgaagaagggtggctttgcggtttctctgatcgacggcgtcacc
ggctccggcaagacagaagtctatttcgaggccgtggccgagaccttgcggcagggcaaa
caggtgctgatcctgctgccggaaatcgcgctgacggcgtcatttctggatcgttttcag
gatcgctttggctccaagccagctgaatggcattccgatctttcgccacgcatgcgcgaa
aaagtctggcgccagacggtgacgggcgaggtgcgggtcgttgccggtgcacggtctgcg
ctcttcctgccgttcgacaatctcggcctgatcattgtcgatgaggagcatgatccggca
tacaagcaggaagatcgtgtctattataatgcccgtgatatggcggtggttcgggcgcgg
atcgcggatttcccggtcgtgctcgtgtcagccacgccatctgtcgaaagtcaggtcaac
ggcacgtctggccgttacaacaccattcatctgcacacgcgttttggcgatgcggcgatg
ccggacttgcatctggtcgatatgcgccgccatccgccggagagaggcggctttctgtcg
ccagtcttgctgcgcggcattgccaagaccatggaaaagggcgagcaatcgctgctgttt
ctcaaccggcgtggttatgcaccgctgaccctatgccgcgtctgcggtcaccgcttccag
tgcccgcaatgttccagctggctggtagagcaccgctttcgcagccagttgcagtgccac
caatgcggtcacaatcaaccgacgccggatcactgcccggaatgcggcaccttcgatcat
ctcgcagcctgtggtcccggcgtggagcgcattgccgaggaggtggagaaacatttcccc
gaggcgcggaccatcgtgctgtcctctgacctgatgggcgtcaaacgcttgcggctggag
ctggaggccatcgtcaaaggtgaggcggatatcgttatcggtacgcagctggtggcgaag
gggcataactttccgctgatgacgttggtgggtatcgtcgatgcggacatcggtttggcc
aatggtgatccgcgcgcggcggagcggacgttccagcttctatcgcaggtcacaggacgt
gcgggacgaacgggcctgaagagccacggcctgttgcagacctatcagccgcaacatccg
gtcatgcaggccatcgtgtctggcgatgccgccgccttttacgagcgggaagttatcgag
cgagaaaaggccttgctgccgccgttcgggcggttggcgtcggtcatcatttccgccgac
acgcgggcggaagccgaaacgcatgcgcgtggtttgcgggcgtcagcgcccccagcctcc
ggcatcatgctgcttggcccggccgaagcgccgctggcattgatccgcgggcgttaccgg
ttccgcttgctcgtccacggcaaacgcaattcagacatgcagtccttcatgcgggccatg
ctgggcagcgggccgaaggagcgcggatcgatccatgtgcaggtggatatcgatccacaa
agttttctctga
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