KEGG   Agrobacterium rubi: G6M88_07935
Entry
G6M88_07935       CDS       T08058                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
arui  Agrobacterium rubi
Pathway
arui02020  Two-component system
Brite
KEGG Orthology (KO) [BR:arui00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    G6M88_07935
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:arui02022]
    G6M88_07935
Two-component system [BR:arui02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   G6M88_07935
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 AAA_2 FleQ HTH_50 AAA TadZ_N AAA_3 OKR_DC_1_N AAA_16
Other DBs
NCBI-ProteinID: QTG00330
UniProt: A0AAE7R1L8
LinkDB
Position
1:1688187..1689551
AA seq 454 aa
MTSSRVLLIDDEEDLRLSTAQALELAGFDVVTVDNADHVFELIGYSFDGVIVSDIRMPGM
DGMTLLQKVRELDAEIPVILVTGHGDVQLAVSAMRNGAYDFIEKPFSVQYLAGIIKRAID
RRSLVLENRRLRAVAGKRDDLETRLPGRTQVMVDLRYRIRAIGAADADTLIIGDTGAGKE
VVARALHDVSARADRPFVAINCAALPQHLIESELFGHEAGAFPGALRPRYGKFEHARGGT
VLLDEIGSMPFDMQGKLLRVLQERTITRLGSNETVELDVRFIATSKADLAQEALAGRFRQ
DLLYRLNVATVHVPSLAQRRSDIPLLFLQLVREAAARYGRDDHDVPSDIVSTLAMQEWPG
NVRELRNAADRLVLGLDGSAADGAQTASENAASLSDKVAEFEKSVLARAIALHKGNLKAV
YETLGISRKTLYEKMQKHALTKHGLVDEDLKTLL
NT seq 1365 nt   +upstreamnt  +downstreamnt
atgacctcttcccgtgtgctgctgatcgacgatgaagaagaccttcgactttccaccgct
caggcgttggaactggccggttttgacgtcgtcaccgtcgacaatgccgatcatgtcttc
gaactgatcggctacagcttcgatggcgtcatcgtcagcgacatcagaatgcccggcatg
gatggcatgacgctgttgcaaaaggtgcgcgagctggatgcggaaatcccggtcattctt
gtcaccggccatggagacgtgcagcttgccgtcagcgccatgcgcaatggcgcctatgac
ttcatcgaaaagccgttcagcgttcaatatctcgcaggcatcatcaagcgcgccatcgac
cggcgctcgctcgtcctggaaaaccgtcggctgcgtgcggtcgcaggcaagcgtgacgat
ctggaaacacgcctgccgggccgcacgcaggtcatggtcgatctgcgctaccgcatccgc
gcgattggcgcagcggatgccgatacgctgatcatcggcgacaccggtgccggcaaggag
gtggtcgcgcgtgcgcttcacgatgtcagcgcacgtgctgaccggcccttcgtcgccata
aattgtgcggccctgccgcagcatctcatcgaaagcgaattgttcggccatgaggcaggc
gcttttcccggcgctttacgtccgcgttacggcaagttcgaacatgcccgtggcggcacg
gttctcttggatgaaatcggctccatgccgtttgacatgcaaggcaagctattgcgggtg
ctgcaagagcgtacgatcacccgccttggctcaaacgagaccgtggagctcgatgtgcgc
ttcatcgccaccagcaaggctgatctggcgcaagaggcgctggcgggccgctttcggcag
gacttgctctaccggctgaatgtcgcgaccgtgcatgtgccgtcgcttgcgcagcgtcgc
tccgatattccgcttctcttcctccaactggtacgcgaggctgcggcacgttacggccgg
gatgatcacgatgtgccctccgatatcgtctcgacacttgccatgcaggagtggcccggc
aatgtgcgcgaactgagaaatgccgcagaccggctggtgctggggctggatggcagtgca
gccgatggggcgcaaacggcatcggaaaatgccgcaagtctctcagacaaagtcgcggag
ttcgaaaaatccgttctggcaagagcgatcgcgctccacaaaggcaatctcaaagctgtc
tacgagacgctcggaatatcgcgcaagacgctttatgaaaaaatgcaaaagcatgcgctg
acgaaacatggcttggtcgatgaagacctgaaaaccctgctctga

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