Agrobacterium rubi: G6M88_08030
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Entry
G6M88_08030 CDS
T08058
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
arui
Agrobacterium rubi
Brite
KEGG Orthology (KO) [BR:
arui00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
arui03016
]
G6M88_08030 (truB)
Enzymes [BR:
arui01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
G6M88_08030 (truB)
Transfer RNA biogenesis [BR:
arui03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
G6M88_08030 (truB)
Prokaryotic type
G6M88_08030 (truB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Zf-C2H2_ZNF451_5th
Motif
Other DBs
NCBI-ProteinID:
QTG00349
UniProt:
A0AAE7RAF6
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All DBs
Position
1:1710191..1711138
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AA seq
315 aa
AA seq
DB search
MSKPRKQQNRKPKGRPISGWLILDKPFDFGSTEAVSKIKWLFNAQKAGHAGTLDPLASGM
LPIALGDATKTVPYVMDGRKIYEFAVSWGEERTTDDMEGEVLNTSPNRPDEQAIRDLLPN
YTGTIMQTPPQFSAIKIAGERAYDIARGGDAVEIPAREVEIHRITLLACPDENTAHFEVE
CGKGTYVRALARDMGRDLGCYGFISQLRRSMVAPFAEDAMVPLAKLIEFEAIEDRDERSA
ALDAYLIDTSEALSSLPHLIINDDQAHRLKMGNPILLRGRDAPTQEMEAYATARGKLVAI
GEIAEGEFRPKRVFG
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaccacgcaaacagcaaaaccgtaagcccaagggccggccgatttccggctgg
ctcattctcgacaagcccttcgatttcggctccacggaagccgtctccaagatcaaatgg
ctcttcaatgcccaaaaggccggccacgccggaacactcgatccgctcgcgtcgggcatg
ttgccgattgctctgggtgacgccacaaagaccgtgccttacgtgatggacgggcgaaaa
atctatgaatttgccgtttcctggggcgaagagcgcaccaccgacgatatggaaggcgaa
gttctcaacacatcgcctaaccgcccggacgaacaggcaatccgtgatctgctgccgaac
tacaccggcaccatcatgcagacgccaccgcagttttccgccatcaagatcgctggcgag
cgcgcctatgatattgcgcgcggtggcgatgccgtcgaaattcccgcccgcgaggtggaa
atccaccgcatcaccctgctggcctgcccggatgaaaatacggcgcatttcgaggtcgaa
tgcggcaagggtacctatgtgcgggcactggcccgcgacatgggccgcgatctcggctgc
tacggcttcatttcccagctgcgccgctccatggtcgcgccctttgccgaagacgccatg
gtgcccttggcaaagctgatcgaattcgaggctatcgaagaccgcgacgagcggtcggcg
gcgctggatgcctatctgatcgacacgtcggaggcgctgtcgtctctgccacacctcatc
atcaatgatgaccaggcgcaccggctgaagatgggcaacccgatcctcctgcgtgggcgt
gatgcgccgacacaggaaatggaggcctatgccacggcgcgcggcaagttggtcgccatc
ggcgagattgccgaaggcgagttccgccccaagcgcgttttcggttaa
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