Agrobacterium rubi: G6M88_08270 Help Entry G6M88_08270       CDS       T08058                                  Symbol rpoN Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism arui  Agrobacterium rubi Pathway arui02020   Two-component system arui02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:arui00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     G6M88_08270 (rpoN)  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     G6M88_08270 (rpoN)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:arui03021]     G6M88_08270 (rpoN) Transcription machinery [BR:arui03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      G6M88_08270 (rpoN) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID 2Fe-2S_thioredx HTH_IclR HU-DNA_bdg Motif Other DBs NCBI-ProteinID:  QTG00393 UniProt:  A0AAE7R1B1 LinkDB All DBs Position 1:complement(1754998..1756539) Genome browser AA seq 513 aa AA seqDB search MALSASLLLRQSQSLVMTPQLMQSIQLLQMTHIELTQFIAQEVEKNPLLEIAANDSELST APLDDGFDRHSEAPEPITDASQDTEEWYGDRANTLNEQLDTNFENVFQDDVAPAKADAPE LVGQWKSMPGAEAGESYDLDDFVASKPSLRDHINQQLPFTVSLPQDRMIADALLDHLDET GYLPADALDDISERLNTSKADIEHVLGALQNLDPPGIFARSLSECLSIQLAQKDRLDPAM KAFVGNLELLAKRDFASLKRLCGVGEDDLLDMLAELRSLNPRPGAGFETGISETIVPDIV VRPSSDGGWLIELNPETLPRVLVNQTYFSEVSKIKTRDGEDGEFLSECMQTASWLTRSLD QRARTIMKVANEIVRQQDAFLLHGVDHLRPLNLKQVADAIKMHESTVSRVTSRKYMLTPR GLFELKYFFSVSIGAVEGGDSHSAEAVRHRIKIMIAQEAPDDVLSDDDIVDNLKKNGVEL ARRTVAKYREAMNIPSSVQRRREKKAIAKVGTA NT seq 1542 nt NT seq  +upstreamnt  +downstreamnt atggccttgtccgccagtcttttgttgcgtcaaagccagtctctggtcatgaccccacaa ctgatgcagtccattcaactgcttcagatgacgcatatcgagctgacgcaattcatcgca caggaagtcgaaaagaacccgctgcttgaaattgcggcaaacgacagcgaattaagcaca gctccgctcgatgacggcttcgatcgccacagtgaggcgcccgaaccgataaccgatgca tcgcaggatacggaagagtggtatggcgaccgcgccaatacgctgaacgaacagctcgac accaatttcgagaatgttttccaggatgatgtcgccccggcaaaggctgatgcgcctgag cttgtcgggcaatggaagtccatgcccggcgccgaagccggagaatcctacgatctggat gatttcgtcgccagcaaacccagtctgcgcgaccatatcaaccagcagcttccctttacc gtatccctaccgcaggaccggatgattgccgatgccctgctggatcatctggatgagacg ggttatctgcccgctgatgcgctggatgatatttccgagcgtctgaacacgtcaaaagca gacatcgagcatgtgctcggcgcgctgcaaaacctcgatccgcccggcatttttgcgcgt tctttaagcgaatgcctgtccatccagcttgcccagaaagatcgtctcgacccggcgatg aaagccttcgtcggaaatctggagcttctggcgaaacgcgactttgcctcgctcaagcgc ctgtgtggcgttggcgaagacgaccttctcgatatgctggccgagttgcgctcgctcaat ccgcgtccgggcgcaggtttcgagacgggcatttcggaaaccatcgtccctgatatcgtc gtgcgaccgtcgagcgacggcggctggctgatcgagctgaacccggaaacattgccgcgc gttctggtcaaccagacctatttttctgaagtctccaagatcaagacgcgcgacggcgag gatggtgaatttctctccgaatgcatgcagacggccagctggctgacccgcagcctggac cagcgcgccagaacgatcatgaaggtcgccaatgaaatcgtgcgccagcaggacgccttt ctccttcacggtgtcgaccatcttcgtccgctcaatctcaagcaggtggccgacgccatc aagatgcacgaatccaccgtcagtcgcgtgacatcacgaaaatacatgctgacgccgcgc ggacttttcgagctgaaatatttcttcagcgtctcgatcggtgcggtcgagggcggcgac agccactcggcggaggcggtgcgccaccgcatcaagatcatgattgcgcaggaagccccc gacgacgtcctgtcggatgacgacatcgtcgacaatctgaagaaaaatggcgtcgaattg gcgcggcgaacggtcgcaaaatatcgtgaagcgatgaatattccctcctccgtacagcgc cgtcgagagaaaaaagccatcgcaaaagttggcacggcgtaa

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