Agrobacterium rubi: G6M88_11480
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Entry
G6M88_11480 CDS
T08058
Name
(GenBank) DUF853 domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
arui
Agrobacterium rubi
Brite
KEGG Orthology (KO) [BR:
arui00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arui03400
]
G6M88_11480
DNA repair and recombination proteins [BR:
arui03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
G6M88_11480
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
FtsK_SpoIIIE
AAA_30
ResIII
AAA_16
AAA_10
T2SSE
TrwB_AAD_bind
nSTAND3
Hydrolase
T4SS-DNA_transf
DUF5852
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QTG00973
UniProt:
A0AAE7R654
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All DBs
Position
1:complement(2415336..2416898)
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AA seq
520 aa
AA seq
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MLQDGKLYIGTSRKADDSLNKGEYLDLRFGNRHGLITGATGTGKTVSLQVLAEGFAKAGV
PVFCADVKGDLSGIAAKGEAKDWVTKRAEQIGFADLAFEQFPVIFWDLYGEKGHRVRATI
AEMGPLLLARLMDASEAQEGVLNIAFKIADQGGLPLLDLKDLQALLNYMGEHASELSNQF
GLISKSSVGSLQRGLLVLEQQGAEHFFGEPALKISDIMRTTSDGRGTISVLAADKLMMNP
RLYGTFLLWMLSELFEELPEVGDPAKPKLVFFFDEAHLLFNDAPRVLVERVEQVVRLIRS
KGVGVYFVTQNPLDVPETVLAQLGNRVQHALRAYTPREQKAVKTAADTFRQNPAFSTADA
ITTLGTGEALVSTLGDKGAPSIVERTLVRPPSGRVGPVSDDERRSIMSTSPVAGIYDTDL
DRESAFELLAARAQKAADAEAAKRAAEEQANQPDAAASRWKLPGFGDEEPTQASTTGAKR
KAGGYQRETVIEAAMKSAARTVASSVGRALVRGILGSLRR
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaggatggaaagctctacatcggcacgagccgcaaagccgacgatagcctcaac
aagggcgaatatctcgacctgcgcttcggcaaccgccacggccttatcaccggcgcgacc
ggcacgggcaagaccgtgtcgcttcaggtgctggccgaaggctttgccaaggcgggcgtg
cctgtgttctgcgccgacgtgaagggcgacctctcaggcatcgcggccaagggtgaggcc
aaggactgggtgacgaagcgcgccgagcagatcggctttgccgaccttgccttcgagcag
tttccggtgattttctgggacctctacggtgaaaaaggccaccgtgtacgcgccaccatc
gccgaaatggggccgcttctgctggcgcgtctgatggatgcgtccgaggcgcaggaaggc
gtgctgaacatcgccttcaagattgccgatcagggcggtttgccgctgctggatctcaag
gatttgcaggcgctgctgaactatatgggcgaacatgcgtcggagctttccaaccagttc
ggcctgatttccaaatcctccgtcggttcgttgcaacgcggcctgctggtgctggagcaa
cagggtgccgaacatttcttcggtgaaccggcgctgaagatttcggacatcatgcgcacc
accagcgatggtcgcggcacgatctcggttctggccgctgacaagctgatgatgaacccg
cgcctttacggcacattccttctctggatgctctcggagctcttcgaagagctgcctgag
gttggcgatcccgccaagccgaaactcgtcttcttcttcgacgaggcgcatcttctgttc
aacgatgcaccgcgtgtgctggtggagcgcgtggagcaggtcgtccgcctcatccgctcc
aagggcgtcggcgtttacttcgtgacgcagaacccgctcgacgtgccggaaaccgtgctg
gcacagctcggcaaccgtgtgcagcacgcgctgcgcgcctatacgccgcgcgagcagaag
gcggtgaagaccgccgccgacaccttccgccagaacccggccttcagcacggcagatgcc
attaccacactcggcaccggcgaagcgctggtttcgacgctgggcgacaagggcgcaccc
tccatcgtggaacgcacgctggttcgcccgccatcaggccgcgtcggccctgtcagcgat
gatgagcgccgcagcatcatgagcaccagcccggtcgccggtatctacgacacggacctg
gaccgtgaatccgccttcgaacttctggccgcccgcgcccaaaaagccgccgatgccgaa
gcggcgaagcgtgccgcagaagaacaggcaaaccaaccggacgctgcggccagccgctgg
aagctgcccggctttggcgacgaggagccaacgcaggcctccaccactggcgcaaaacgc
aaggctggcggctatcagcgcgaaacggtgatcgaggcggcgatgaagagtgcggcacgg
actgtggcaagctcggtggggcgtgcattggtgcggggtatcttggggagtttgcggcgg
taa
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