Agrobacterium rubi: G6M88_12460
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Entry
G6M88_12460 CDS
T08058
Name
(GenBank) lytic transglycosylase domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
arui
Agrobacterium rubi
Brite
KEGG Orthology (KO) [BR:
arui00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
arui01011
]
G6M88_12460
Enzymes [BR:
arui01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
G6M88_12460
Peptidoglycan biosynthesis and degradation proteins [BR:
arui01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
G6M88_12460
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
ANAPC3
Motif
Other DBs
NCBI-ProteinID:
QTG01147
UniProt:
A0AAE7R8Z3
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All DBs
Position
1:complement(2591999..2594071)
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AA seq
690 aa
AA seq
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MKKTAFGLLAAGLAATVWSAWAGPSPDGVAPLPYVKPNAPAVPAFLPASPDVTGSIIRPN
MPLDVSDLKAGLDALSSRDAARAMSIRNALPITSLDRHILTWAIAISGQRDVPSSEITAA
QRVLNGWPGIATLRANSERAMLRESPQPSDVIAYFATTAPETPEGTLALATAFNTSGHSD
QAQTLIRRIWTSETMDTGLEDRVLSQFSGLLSVADHKARMDYLMYRNRVSQAKRFGDLGK
VPQLYTAWAAVLQKSKTAAVALNAVPAAMRNDPAYLYARIENLRHQQKYEEAAALLAQAP
KDPVKLGDPGEWWNERRIVARGLADLGDFKQAYNIVANHSATSAVDIADAEFHAGWYALR
ALQDPASAAKHFNALLQASNRPLSASRAYYWLGRTAEAGGPGNARDYFTKAAANPGTFYG
QLAAARIGTTTINVTYPSPTDNDRQHFADREAVRAIERLEAAGYSWRADSLYRALAEQMD
SPGELAILATRAEANNNHQVSLQIGKTAFSRGIDAAALAYPIGVIPGSANISGSGKALAY
AIARQESAFNPAAVSPANARGLLQLLPGTAKGVASRHGMDFTQAKLTTDAGYNATLGAHY
LGEQIDSFGGSYILTFVAYNAGPKRVPEWIARYGDPRGKPIDDVVDWIERIPFPETRNYV
QRVMENYQIYKTRLGQKADIVTDLRDGRPG
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaacagcttttggcctgctggcagcgggtcttgccgcaaccgtctggagtgct
tgggcaggcccgtcaccagatggcgtggcgcccctgccctatgtgaagccgaacgctcct
gctgttccggcgttcttgccagccagccccgatgtgaccggctccattattcgccccaac
atgccgctcgatgtgtccgacctgaaagcgggcctcgacgccttgtcgagccgcgatgcc
gcgcgtgctatgagcattcgcaatgccctgcccatcaccagtctggaccgtcatattctg
acatgggcgattgcgatttccggccagagggatgttccgtcaagcgaaatcacggctgcc
cagcgtgtcttgaacggatggccagggattgcgacgcttcgcgcaaactccgaacgcgcc
atgctgcgcgaaagccctcagccctctgacgtcatcgcctatttcgcaacgaccgcgcct
gaaacgccggagggcaccttggcgcttgccaccgcgttcaacacgtcaggccatagcgat
caggcgcaaacgctgatccgccgtatctggacgagcgagaccatggatacgggtctggaa
gatcgcgtcctaagccagttctccggccttttatcagttgccgatcacaaggcgcggatg
gattacctgatgtatcgcaaccgggtcagccaggccaagcgcttcggcgatctcggcaag
gtgccgcagctttataccgcctgggcggccgttctgcagaaatcaaagacggcggccgtg
gcgctcaacgccgttcccgccgccatgcgcaacgacccggcttacctgtacgcgcgcatt
gaaaatctgcggcatcaacaaaaatacgaagaggccgccgcacttctggcgcaggcgccg
aaggacccggtaaagctgggcgatcccggggaatggtggaacgagcggcgcatcgtcgcg
cgcggtctggcggatctcggcgatttcaagcaagcgtacaatattgtcgcaaaccattcc
gccacctctgccgtggatattgccgatgcggagtttcacgcgggctggtatgccttgcgg
gcgctgcaggacccggcctcggcggccaaacatttcaatgcgcttctgcaagcctccaac
cgcccgctttcggcatcgcgcgcctattattggctcgggcggacggctgaggcaggcggg
ccgggcaatgcgcgcgactatttcaccaaggctgccgccaatcccggcacgttttacggc
cagcttgctgccgcgcgaatcggcacgacgacgatcaacgtgacctacccgtctccaacg
gataatgatcgacagcactttgccgaccgtgaagccgtgcgtgccatcgaacggctagaa
gcggcgggttatagctggcgggcagacagtctttaccgggcgctcgccgagcagatggac
agtcccggcgagttggcaattcttgcgacgcgagcggaagccaacaacaatcatcaggtt
tcgctgcaaatcggtaaaacagcgttcagtcgcggcattgatgcggcggcactcgcctac
cctatcggtgtcattcctggcagtgcgaatatttccggctccggcaaagctttggcctac
gccatcgccagacaggagagcgccttcaacccagcggcggtttcccccgccaatgcgcgc
gggctgctgcagctgctgcccgggactgcaaaaggtgtggccagccgtcacggcatggat
ttcacccaggccaagctcaccacggatgccggctataacgcgacactcggcgcccattat
ctgggcgagcagatcgacagcttcggcggctcctatatcctgactttcgtcgcctataat
gcaggtcccaagcgcgtaccggaatggattgcccgttacggcgacccccgcggcaaaccc
atcgacgacgtcgtcgactggatcgagcgcatccccttccccgaaacccgcaactatgtg
cagcgggtcatggaaaactaccaaatctacaaaacccgtctcggccagaaggccgacatc
gtcaccgacctgcgagacggcagacccggctga
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