Agrobacterium rubi: G6M88_12535
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Entry
G6M88_12535 CDS
T08058
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
arui
Agrobacterium rubi
Pathway
arui03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
arui00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
G6M88_12535 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arui03400
]
G6M88_12535 (recO)
DNA repair and recombination proteins [BR:
arui03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
G6M88_12535 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
G6M88_12535 (recO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
QTG01162
UniProt:
A0AAE7R900
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All DBs
Position
1:2607323..2608060
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AA seq
245 aa
AA seq
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MQWQDDAIILGVKRHGETSVIAELMTRTRGRYLGLVRSGRSRSMQPVLQPGNRVDVTWRA
RLHDHLGEYRIEPLQLRAAQLMETATAVYGVQAMAALLRLLPERDPHPHLFEALDVILDN
LSDPADAGELFVRFELAVLNDLGFGLDLNECAATGLRDDLIYVSPKTGRAVSRHAGAPYA
ARMLALPQFLSKENSKAADSESLAAAFRLTGHFLHRHVYEPRGLDENSTRDGFVQAALKA
LNKAG
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgcagtggcaggacgatgcaattattctcggcgtaaagcgccatggtgagaccagcgtc
attgccgagctgatgacccgcacccgtgggcgatatcttggacttgtccgctccggtcgt
tcgcgcagcatgcagcccgttcttcaacctggcaaccgcgtggacgtgacatggcgcgcg
cgtctgcatgatcatctgggcgagtaccgtatcgaaccgctgcaattgcgcgcggcgcaa
ttgatggaaacggcaaccgccgtttacggcgttcaggctatggcggcgctgctgcggctc
ttgccggagcgcgatccgcatccgcatctgtttgaagcgctggatgtcatcctcgacaat
ctttccgatcctgccgatgcgggagagctgttcgttcgcttcgagttggcggtgctcaac
gatctcggcttcgggctcgatctcaacgaatgcgcagccacgggtcttcgcgatgacctc
atctatgtctcgccaaagacgggcagggcggtttcgcgtcatgctggcgcgccctatgcc
gcgcgcatgctggcgctgccgcagtttctgagcaaggaaaactcaaaggcggccgacagc
gaaagccttgcggcggcgtttcggctaaccggccattttctgcatcggcacgtctatgag
ccgcgcggcctggatgaaaactccacccgtgacggtttcgtacaggcggcattgaaggcc
ctgaacaaggctggctga
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