Agrobacterium rubi: G6M88_15260
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Entry
G6M88_15260 CDS
T08058
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
arui
Agrobacterium rubi
Pathway
arui00521
Streptomycin biosynthesis
arui00523
Polyketide sugar unit biosynthesis
arui00525
Acarbose and validamycin biosynthesis
arui00541
Biosynthesis of various nucleotide sugars
arui01100
Metabolic pathways
arui01110
Biosynthesis of secondary metabolites
arui01250
Biosynthesis of nucleotide sugars
Module
arui_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
arui00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
G6M88_15260 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
G6M88_15260 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
G6M88_15260 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
G6M88_15260 (rfbB)
00525 Acarbose and validamycin biosynthesis
G6M88_15260 (rfbB)
Enzymes [BR:
arui01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
G6M88_15260 (rfbB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
KR
Gp_dh_N
NmrA
Motif
Other DBs
NCBI-ProteinID:
QTG01835
UniProt:
A0AAE7R489
LinkDB
All DBs
Position
2:complement(196003..197064)
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AA seq
353 aa
AA seq
DB search
MRVLVTGGAGFIGSSVVRHLIDDKHYDVLNIDKLTYAGTLTSLISVKDNPLYRFENADIC
DKAAVMQAISSFRPDRIMHLAAESHVDRSITGAKDFVETNVLGTFNMLECARAYWQSLDG
GAKETFRFLHISTDEVYGSLAEEGLFTESTPYDPSSPYSATKAASDHLAKAWERTYGLPV
VVSNCSNNYGPFHFPEKLIPLMIISALEGKPLPVYGNGGNVRDWLFVEDHAKALNIIAER
GRVGDTYNVGGRNERQNIDVVNRICGLMDEFRPEHGPHSKLITYVQDRPGHDARYAIDAT
KLERELGWKAVENFDTGIEKTVKWYLENKWWWAPLRQGYKGDRLGLIPDGSAA
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtacttgttaccggcggtgcaggttttatagggtcttctgtcgtaagacatctt
atcgacgataaacactatgatgtattgaatatcgataagttgacctatgcaggtacgctt
acgtctttgatatctgtgaaagataatccgctatatcgcttcgagaatgccgacatctgc
gacaaggcagcggtaatgcaggccatttcaagcttcaggcctgatcgcatcatgcatctg
gctgccgaaagccacgttgaccggtctatcacgggagccaaggattttgttgaaacgaat
gttcttggtacattcaatatgctcgaatgcgcgcgtgcttattggcagtctttagacggc
ggcgccaaagagacatttcgtttcctccacatttcaactgatgaagtctatggatcgttg
gccgaggaaggcctgtttaccgaatccacgccatatgatcccagttcgccctactctgca
acgaaagcagcctctgaccatctcgcgaaggcgtgggagagaacgtatggcttgccggtt
gtggtctccaactgctcgaataattatggaccattccacttcccggaaaaactcattccg
cttatgatcatcagtgcgctagagggcaaacccttgcccgtttatggcaacggcggcaat
gtgcgtgactggctgtttgtcgaagatcatgcaaaggccctgaatatcatcgccgagcgc
ggacgtgttggcgatacatataatgtggggggccgaaacgagcggcaaaatattgatgtc
gtcaaccgcatttgtggccttatggatgagtttcgccctgaacacggcccacattccaaa
ttgataacatatgttcaggatcgtcccggacatgatgcccgctacgcaatcgatgcaact
aagctcgagcgagaactgggctggaaagccgtcgaaaacttcgacaccggaatcgagaaa
acagtaaaatggtatctcgagaacaaatggtggtgggctccgttgcggcaagggtataag
ggtgaccggctgggtcttatacccgatggatctgcggcatga
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