Agrobacterium rubi: G6M88_16415
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Entry
G6M88_16415 CDS
T08058
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
arui
Agrobacterium rubi
Pathway
arui02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
arui00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
G6M88_16415
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
arui02000
]
G6M88_16415
Transporters [BR:
arui02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
G6M88_16415
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
QTG02038
LinkDB
All DBs
Position
2:455881..457167
Genome browser
AA seq
428 aa
AA seq
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MTETKKPTSISRRTLLKTASAAAGLVAGSGAITGFPTIWAQNPITLRQFGTGVSNLNAIA
EKCKADLGITLEMTATDSDAAAQRAVTQPNSYDIADIEYWILKKVYPAGVIQPMEVKKLK
YYDKVVPLFKNGKLKPDSVIAQGTAPHTVGFVEKPGTKTFAKSETEWFTMMPTIYNADTL
GIRPDLVGREISTWADIMDPKFKGKTSILNIPSIGIMDAAMIMEAMGKLKYADKGNMTKE
EIDKTIEFLIEAKQAGQFRAFWKSFDESVNLMASGEVVIQSMWSPAVAAVRSKGIACKYQ
PLKEGYRSWGGGLGLAKHLTGAKLDAAYEYINWYTSGWVGAYLNRQGYYSAAMDTAKEHM
SADEWGYWIEGKPAQGDIVAPDGKVMEKAGAVRDGGSFEERMGHVACWNSVMDEDRYMVR
RWNEFIAA
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagaccaagaaaccaacaagcatttcgagacgcacgctgttgaagacggcatcc
gccgcggcaggccttgtcgcaggttccggcgccatcaccggcttcccgaccatctgggcg
caaaaccccatcacgctgcgccagttcggcacgggcgtatcgaacctcaatgccattgcc
gaaaaatgcaaggcagacctcggcatcacgcttgagatgacggcaaccgattccgacgct
gccgcccagcgtgctgtcacccagccgaattcctatgacattgccgacatcgaatactgg
atcctcaagaaggtctatccagcaggcgtcatccagccgatggaagtgaagaaactcaaa
tattacgacaaggtcgttccgctgtttaaaaacggcaagctgaaacccgacagcgtgatt
gcacaaggcacggccccgcacaccgttggcttcgtcgaaaagcccggcaccaagacgttt
gccaagagtgaaacagaatggttcacgatgatgccgacgatctacaatgccgatacgctc
ggcattcgcccggatctggtgggtcgcgaaatatcgacttgggccgatatcatggaccca
aaattcaagggcaaaacatccattctcaacatcccgtccatcggcatcatggatgcagcg
atgatcatggaagccatgggcaagctcaaatatgccgacaagggcaacatgaccaaggaa
gagatcgacaagacgatcgaattcctgatcgaagcgaaacaggcaggtcagttccgcgcg
ttctggaagtcctttgacgagagcgtcaacctgatggcatcaggcgaagtggtcatccag
tccatgtggtcgccagccgttgccgcagttcgctccaagggcatcgcctgcaaatatcag
ccgctgaaggaaggctatcgctcatggggtggtggtcttggtctcgccaagcacctgacc
ggtgcgaagctggatgccgcctacgaatatatcaactggtacacgtccggttgggtcggc
gcctatctcaatcgtcagggctactattccgcggccatggacacggcgaaggaacatatg
tcggccgacgagtggggctactggattgaaggcaagccagcgcagggcgatatcgtcgct
cccgatggcaaggtcatggaaaaggcgggcgcggtgcgcgatggcggctcgttcgaagag
cgcatgggtcacgtcgcgtgctggaactccgtcatggatgaagaccgctacatggttcgc
cgctggaacgaattcatcgcggcctaa
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