Agrobacterium rubi: G6M88_16970
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Entry
G6M88_16970 CDS
T08058
Name
(GenBank) ABC transporter permease
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
arui
Agrobacterium rubi
Pathway
arui02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
arui00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
G6M88_16970
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
arui02000
]
G6M88_16970
Transporters [BR:
arui02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
G6M88_16970
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Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
QTG02128
LinkDB
All DBs
Position
2:complement(586440..587369)
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AA seq
309 aa
AA seq
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MATGAISNTAERSTVPVGIRIRERFFSGGLFWLLVLPAFLFFLVFFVVPTASLFALAFNK
STAGVISLSSVITFDNFVRIFTRSIYYESILRSVGIAAVVSLICLLFGYPLAYVIAKTVN
PGRNALLMILVLSSMQLDMVIRLYGLMVLLGDNGLINGALIKMGVISAPLPLMYNTFGVV
VGLVQITLPFMVLSLIGIIKSIHPSLEEAARSLGASRAKAFTSIVLPLSMPGILAGTLLV
FALAISSYVVPALMGGWKVMVMPIHIYQQVAETGRWQFGAAIAVVLFVTSLMAIAVYQRV
AMRTTGGRS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaggcgcaatcagcaataccgcagaaaggagcacggtgcctgtcggcatccgg
ataagagagcgcttcttttccggtgggctcttctggttgctcgtgcttcctgcattcctg
ttctttctcgtcttcttcgtcgtgccgaccgcctcactgttcgcgctcgctttcaacaag
tcgacggctggcgtcatcagcctgtcgagcgtaatcaccttcgacaatttcgttcgcatc
ttcacgcgctcgatctactacgaatcgatcctgcgctcggtgggcattgcggcggtcgtc
tcgctcatatgccttctcttcggttatccgctggcctatgtcatcgccaagaccgtcaat
ccaggccgcaacgcactgttgatgatcctggtgctgtcgtccatgcagctcgacatggtt
atccggctctatggtctcatggttctcttgggcgataacgggctcatcaatggtgcactg
atcaagatgggcgtcatttccgcaccgctgccgttgatgtacaatacgttcggtgtcgtg
gtcgggcttgtgcagatcacgctgcccttcatggttctgtcgctgatcggcatcatcaaa
tcgatccacccgtcgctggaagaagcggcacggtctttgggtgcatcccgcgcaaaggcg
tttacgtccatcgtcctgccgctgtccatgccgggaattctggccggaacgctgctggtc
tttgcactcgccatttcgtcctatgtggtgcccgctctgatgggcggatggaaggtcatg
gtcatgccgatccatatttaccagcaggtggccgaaaccggtcgctggcagtttggcgcc
gccattgccgtcgtccttttcgtcaccagcctcatggccatcgccgtctaccagcgggtt
gcaatgcgcacgacaggaggacgcagctga
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