Agrobacterium rubi: G6M88_18495
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Entry
G6M88_18495 CDS
T08058
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
arui
Agrobacterium rubi
Pathway
arui02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
arui00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
G6M88_18495
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
arui02000
]
G6M88_18495
Transporters [BR:
arui02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
G6M88_18495
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_11
SBP_bac_6
Peptidase_M4
Motif
Other DBs
NCBI-ProteinID:
QTG02399
UniProt:
A0AAE7R728
LinkDB
All DBs
Position
2:925309..926538
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AA seq
409 aa
AA seq
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MPMKYLAIAVLALAATAAPCLAADTNMKNLDFDLSKVTRENFYDVVVPAAKAEGSVTMYN
FAGSFADTWKELITSFEAKYGIKVSYSDVNGDQANQQLIAVHAAGQDSPVDAYFAGGGEY
PLLSSKGVVGKIALTDILPNMANYDPVLAKNLFGKDHGGTYPLVHMNQTAIGYDSAFVKP
EDLPKSFEELLTWAEKNPKRLGVTLPAKGGSGSGFIYSVALNYLTGDCRTQLTDYSKTLQ
EAEDWAMTSECLNPVWDYYKRLLPVAELTNGNADTLNLINNQQLYIGTVWEDQVMTFLGN
KQLPESFRLTLLEKGQVGSGDAMFVPANAKHVAAALLLIDMAMSKEFQTWKLEHKASRSP
RLDVTNDMMPKDAQLHVLPKEVYPRLSVPAFWDMAKALGEALDEKVLNQ
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgcctatgaaatatcttgcgatcgccgtgcttgcgctggcggcgacggcggcgccttgt
ctggcggcagacaccaatatgaagaacctcgatttcgatctgtcgaaggtcacgcgcgaa
aatttctatgacgtcgtcgttcccgccgccaaagccgagggctcggtgacgatgtataat
ttcgccggcagttttgccgatacctggaaggaactgatcaccagcttcgaggccaaatat
ggcatcaaggtctcgtatagcgacgtaaatggcgatcaggcgaaccagcagctgattgcc
gtccatgccgcaggccaggattcgccggtggatgcgtatttcgccggtggcggtgagtac
cctcttctgtcttccaaaggtgtcgtcggcaagattgcattgacggacatcctgcccaac
atggccaattacgatccggttctggcaaaaaacctgttcggcaaggaccatggcggcacc
tatccgctggtgcacatgaaccagacggcgatcggttatgactcggctttcgtgaagccc
gaagatctgccgaaaagcttcgaagagttgctcacttgggcggaaaagaaccccaagcgt
ctcggcgtcactcttccggccaaaggcggttccggcagcggttttatttattcggtcgcg
ctcaactatctgaccggcgactgccgcacgcagctgacggattacagcaagacgctgcag
gaggccgaagactgggcgatgacatccgaatgcctgaacccggtttgggactactataag
cgcttgctccccgtcgccgaattgaccaatggcaatgccgatacgctgaacctcatcaac
aaccagcagctctatatcggcacggtctgggaagatcaggtcatgacgttcctgggcaac
aagcaacttcccgaaagctttcgtctgacattgctggaaaagggtcaggtaggttccggc
gatgccatgttcgtgcctgccaatgccaaacacgtggccgctgccctgcttctgatcgac
atggcgatgagcaaggaattccagacatggaagctggaacacaaggcctcgcggtcaccg
cgtctcgacgtcaccaatgacatgatgccgaaggatgcacagctgcatgtcctgcccaag
gaggtttatccgcgcctttcggttcccgccttctgggacatggcgaaggcacttggcgaa
gcgctggatgaaaaggtgctcaaccagtag
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