Agrobacterium rubi: G6M88_19225
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Entry
G6M88_19225 CDS
T08058
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
arui
Agrobacterium rubi
Pathway
arui02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
arui00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
G6M88_19225
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
arui02000
]
G6M88_19225
Transporters [BR:
arui02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
G6M88_19225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QTG02525
UniProt:
A0AAE7R5R0
LinkDB
All DBs
Position
2:complement(1088224..1089720)
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AA seq
498 aa
AA seq
DB search
MSRKIMTALILAGGLMAGSASAADLRIALADDPDALDPVSNAASTGISVLSTMCERLLYT
DAKLNILPGLAERWEWSDDALSLTLHLAKDVKFQDGTPFDSAAVKVNLDRARKPGTQRYS
DLTSISSIETPDPQTVVIKVAQPAAQLLGTLAERNGMYFSPKALEREGANVGRAPVCVGP
YKFVSRVAQDRITLEKDPNYRFAKDYSFDRVIFRIIPADSVRLANLQSGDVDMIEKLDPA
LADTVKSDDSLAMIQNFAANSQALMFNLERKGPMQDPRVRHALELSLDKQAIVDAVFAGY
YKAANQFASPDSPFYNMDFPIPARDVAAAKKLLDEAGVKQPVPFTMLVPNRPLSVRVGEL
IQAMTVEAGFDTKLNVVDFATTLKLTADGDFESWGPIGQQSANDLDTLAVPVLSSKGGRN
VGKYNNPEMDRLLDATRAAVDPKERIALFKQAQALVAKDLPVIYLYHQAPIFALKASLKG
VTLTGDGFPILRGAKIEG
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgcaagattatgacggccttgatattggccggggggctgatggccggttctgca
agcgccgccgatctgcgcattgcgctcgccgatgacccggatgcactggacccggtatcc
aacgctgcctcgacgggcatttcggttctgtcgaccatgtgcgaacggttgctctatacc
gatgctaaactcaacattctgccaggccttgccgaacgctgggagtggtcggatgacgcc
ctgtcgctgacgttgcatctggcaaaggacgtcaagttccaggacggaacgccgttcgat
tccgctgccgtcaaggtcaatctcgaccgcgcccgcaagcccggcacgcagcgttattcc
gacctcaccagcatctcctccatcgaaacgcccgatccacagacggtcgtcataaaagta
gcgcagcctgccgcccagctgttgggaacgctggccgagcgtaacgggatgtatttctcg
cccaaagccttggagcgtgaaggcgcaaacgtcggtcgcgcacccgtctgcgtcggccct
tacaagttcgtcagccgcgttgcgcaggaccgcatcactctggagaaagacccgaactat
cgctttgccaaggactattcctttgatcgcgtgatcttccgcatcattccggctgacagc
gtgcgtttggccaaccttcagtccggcgatgtcgatatgatcgaaaagctcgatccggcc
ttggccgataccgtcaaatcggacgacagccttgcgatgatccagaactttgccgccaat
tctcaggcgctgatgttcaaccttgaacgcaagggcccgatgcaggacccgcgcgttcgt
cacgcgctggagctttcgctggataaacaggccatcgtggatgcggtttttgccggctac
tacaaggcggccaaccagttcgccagcccggattcgccgttctacaacatggattttcct
attccggcccgcgatgttgccgcagccaagaaactcctggatgaggcgggcgtgaagcag
cccgtgccctttaccatgctggtgccgaacagaccgttgtccgtgcgcgtcggtgaactc
attcaggccatgacggtggaggctgggttcgataccaaactcaatgtcgttgatttcgcg
accacgctcaagctgaccgccgatggcgatttcgaatcctgggggccaatcggccagcaa
tccgccaacgatctggacaccttggccgtgccggtcctgtccagcaaaggcgggagaaac
gtcggcaaatacaacaacccggaaatggatcgccttctcgatgccacccgtgcagccgtc
gatccaaaggagcgcatcgcactgttcaagcaggcgcaggccctagtcgcgaaggacctg
ccggtgatctacctctaccatcaggcaccgatcttcgcgctgaaagccagcctgaagggc
gtgaccctgacaggcgatggtttcccgattttgcgtggcgccaagatcgaagggtaa
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