Agrobacterium rubi: G6M88_20280
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Entry
G6M88_20280 CDS
T08058
Symbol
pcaH
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
arui
Agrobacterium rubi
Pathway
arui00362
Benzoate degradation
arui01100
Metabolic pathways
arui01120
Microbial metabolism in diverse environments
arui01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
arui00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
G6M88_20280 (pcaH)
00624 Polycyclic aromatic hydrocarbon degradation
G6M88_20280 (pcaH)
Enzymes [BR:
arui01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
G6M88_20280 (pcaH)
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
SdrD_B
Motif
Other DBs
NCBI-ProteinID:
QTG02716
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All DBs
Position
2:1321667..1322407
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AA seq
246 aa
AA seq
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MTNKPPETGPFFARDHSIHPPAYAPGYKTSILRSPQRALISLEGTKSEITGPVFGHSLLN
PLDNDLILNYARPGELPIGPRILVHGRVLDERGKGVDGALVEFWQANAGGRYLHKKESYL
APVDPNFGGVGRTITDADGYYWFKTIQPGAYPWPNGVNDWRPAHIHFSVFGHGFSQRLIT
QMYFEGDPMIWQCPIVKTIPDKAAIERLVAALDMTSAIPMDMRAYKFDIVLRGRRSTLFE
NRTEGN
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacaagccgccagagaccgggccttttttcgccagagatcacagcattcatccg
cctgcctatgcacccggatacaagacctccattctgcgttcgccgcagcgggctcttatt
tctctggagggcacgaaaagcgaaatcacaggccccgtctttggccacagtcttctcaat
ccgctcgacaacgaccttatcttgaattacgcgcgcccaggcgaattgcccatcggtcca
cgcattctggtgcatggccgcgttctggacgagcgtggcaagggtgtcgacggcgctctg
gtggagttctggcaggccaatgcgggcggtcgctaccttcacaagaaagaaagctacctg
gctccggtcgatccgaacttcggtggcgttggccgcacgattaccgatgcggatggctat
tattggttcaagacgatccaaccgggcgcctatccatggcccaatggcgtcaacgactgg
cgccctgctcacatccacttctccgtgttcggccacggcttttcgcagcgtctgatcacc
cagatgtatttcgaaggcgatccgatgatctggcaatgtccaatcgtcaaaaccattccc
gataaggcagccatcgagcggctggtggctgcattggatatgacatcggccattccgatg
gacatgcgcgcttacaaattcgatatcgtcctgcgcgggcgccgctcgaccctgtttgaa
aaccgcacggagggcaactga
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