Agrobacterium rubi: G6M88_24480
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Entry
G6M88_24480 CDS
T08058
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
arui
Agrobacterium rubi
Pathway
arui03420
Nucleotide excision repair
arui03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
arui00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G6M88_24480
03430 Mismatch repair
G6M88_24480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arui03400
]
G6M88_24480
Enzymes [BR:
arui01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G6M88_24480
DNA repair and recombination proteins [BR:
arui03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G6M88_24480
MMR (mismatch excision repair)
Other MMR factors
G6M88_24480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_11
HHH
HHH_5
AAA_12
ResIII
Motif
Other DBs
NCBI-ProteinID:
QTG03601
UniProt:
A0AAE7R982
LinkDB
All DBs
Position
pW2_73_2:131722..133788
Genome browser
AA seq
688 aa
AA seq
DB search
MAVAYLEKLNEQQRKAVEHGVGLAEGNTVGPLLIIAGAGSGKTNTLAHRVAHLIVNGADP
RRILLMTFSRRAASEMARRVERICRNVLGANAGIMTDALAWSGTFHGIGARLLRMYAEQI
GLNLDFTIHDREDSADLMNLVRHELGFSKTEIRFPTKGTCLAIYSRAVNSETPLNEILRQ
HYPWVATWEEQLKELFGAYVGAKQSQNVLDYDDLLLYWAQMVSDPDLADDIGNRFDHVLV
DEYQDTNKLQSSVLMALKPGGRGLTVVGDDAQSIYSFRAATVRNILDFPTSFSPAADVIT
LDRNYRSTQPILAAANGVIELARERFTKNLWTERESLERPKLVTVKDETEQANFIVEQVL
ANRETGMMLKQQAVLFRTSSHSGTLEVELTRRNIPFVKFGGLKFLDSAHVKDMLAVLRFA
QNPRDRVAGFRLLQMLPGIGPKKAGTILDTIASDPEPLLALAEIPPPPKTGEDWTSFVQL
LAGLRKTQEGWPSDIARARLWYEPHLDRIHEDADTRKADLLQLEQIAGGYPSRERFLTEL
TLDPPDATSDQAGVPLLDEDYLILSTIHSAKGQEWRSVFMLNVVDGCIPSDLGTGTTQEL
EEERRLLYVGMTRAKDSLSLITPQRFFTHGQNSQGDRHVYASRSRFIPATLLQYFEPTAW
PKVSAAASERSAQQIRIDVGARMRGMWK
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggcggttgcctatctggaaaaactgaacgagcagcagcgcaaagccgtcgagcatggc
gtcgggctcgctgagggcaacacggtagggcctctgctgatcattgcaggtgccggctct
ggtaagaccaatacgctggctcaccgcgtggcccatcttatcgtcaatggtgcggacccg
cgccgcattctgctgatgaccttttcgcgcagagccgcgtctgaaatggcccgccgcgtc
gagcgcatctgccgcaatgtactgggtgccaatgctggcatcatgacagacgcccttgcc
tggtccggcacgttccatggcatcggcgcgagactgctacggatgtatgccgagcagatc
ggtctcaacctggacttcaccatccatgatcgggaagacagcgccgatcttatgaacctc
gtgcggcacgagctcggattttccaaaacagagatccgtttcccgaccaagggcacctgt
cttgcgatctattcacgcgcagtcaactcggagacgccgctgaacgagatcctgcgccag
cactatccatgggtcgccacatgggaagaacagttaaaggaattgttcggagcttatgtc
ggggccaagcagtcgcagaacgttctcgattacgatgatctcctgctctattgggcacag
atggtcagcgatcccgatctcgccgacgatatcggcaatcgcttcgatcatgtcttggtc
gatgaatatcaggataccaacaagctccagtcgtcagtcctgatggcgctcaagcccggc
ggacgtggcttgaccgtcgtcggcgacgatgcccaatcgatctactcgttccgggcagcg
acggttcgcaacattctcgactttccaacatctttcagccctgccgctgatgtcatcaca
ctcgatcgaaattatcgttcaacccaacccattctggcggcagccaatggcgtgatcgaa
ctggcgcgcgaacgtttcaccaagaacctgtggaccgaacgggagtcgctcgagcgaccc
aaactcgtgaccgtcaaggacgagaccgaacaggccaatttcattgtcgagcaggtgctg
gccaatcgtgagactggcatgatgctgaaacagcaggctgtcttgtttcgcacctccagt
cacagcggcacgcttgaagtcgaactcacccgtcgcaatattccgttcgtcaaattcggc
ggtttgaagtttctcgacagcgcccacgtgaaggacatgctggccgtgctgcgtttcgcc
caaaaccctcgtgatcgggtcgctggttttcgtcttctgcaaatgttgcccggcattgga
ccaaagaaagccggcaccattctcgacacgatcgcgtccgatcccgaacctctcctggcg
cttgctgaaattccaccaccaccgaagactggcgaggactggacgtcgttcgttcaattg
ctggcagggcttcgcaaaacgcaggaaggctggccatcggatatcgcgcgagctcgcctg
tggtacgaaccccatctcgatcgcatccatgaggatgccgatactcgtaaggccgacctc
ctgcagctagagcagatcgccggcggctatccttcgcgcgaacgtttcctgaccgaactg
acactcgacccaccggatgccacaagcgatcaggcgggcgtaccgctgctcgatgaagac
tatctcatcctatcgaccatccattccgccaaggggcaggaatggcgttccgtgtttatg
ctgaatgttgtcgatggctgcataccatcggacctggggacaggaacgacgcaggagctc
gaggaggaacggcgtctgctctatgtcggcatgacgcgggccaaggatagcctgtcgctc
atcaccccgcagcggtttttcacgcacggtcagaactcgcagggcgacaggcacgtctat
gcatcgcgttcgcggttcatcccggcgacgctgctacagtatttcgaaccgacggcgtgg
cctaaagtctcggccgcagcatctgagcgtagtgcccagcagatccgcatcgatgtcggc
gcacgcatgcgcggcatgtggaaatag
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