KEGG   Agrobacterium rubi: G6M88_25215
Entry
G6M88_25215       CDS       T08058                                 
Name
(GenBank) T-DNA border endonuclease VirD2
  KO
K18434  type IV secretion system T-DNA border endonuclease VirD2
Organism
arui  Agrobacterium rubi
Brite
KEGG Orthology (KO) [BR:arui00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:arui02044]
    G6M88_25215
Secretion system [BR:arui02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   G6M88_25215
SSDB
Motif
Pfam: Relaxase
Other DBs
NCBI-ProteinID: QTG03749
UniProt: A0AAE7R9F1
LinkDB
Position
pTiW2_73:104950..106293
AA seq 447 aa
MPDRAQVIIRIVPGGGTKTLQQIINQLEYLSRKGRLELQRSARHLDIPLPPDQIHELARS
WVQETGTYDESQPDEERQQELTTHIIVSFPAGTSQVAAYAASREWAAEMFGSGAGGGRYN
YLTAFHIDRDHPHLHVVVNRRELLGHGWLKISRRHPQLNYDALRIKMAEISLRHGIALDA
SRRAERGITERPITYAQYRRLEREQARQIRFEDADLEQSSPQGDHPEFSQPFDTSPFEAS
AGGPEDMPRPNNRQNESQVHLQEPAGVSNEAGVLVRVALETERLAQPFVSETILADDIGS
GSSRVAEGRVESANRTPDIPRAATEAATHTTHDRQRRAKRPHDDDGGPSGAKRVTLEGIA
VGPQANAGEQDGSSGPLVRQAGTSRPSPPTATTRASTATDSLSATAHLQQRRGVPSKRPR
EDDDGEPSERKRERDERSKDGRGGNRR
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgcccgatcgagctcaagttatcattcgcattgtgccgggaggtggcaccaagaccctt
caacaaattatcaatcagttggagtatctatcccggaagggcaggctggagctgcagcgt
tcagcccgacatctcgatattcccctgccaccggatcaaatccacgaacttgcccgaagc
tgggttcaagagactggaacttatgacgaaagtcagccagacgaggaaaggcaacaggag
ttgaccacccatattattgtaagcttccccgcgggtacaagccaggtagcggcttatgcg
gcgagccgggagtgggcagccgagatgttcgggtcaggcgcaggggggggccgatacaac
tatcttacggccttccacatcgatcgcgaccacccacatctgcatgtcgtcgtcaatcgg
cgcgaacttttaggacacggctggctgaagatatctcggcgccatccccaactgaattac
gacgccctgcgcataaagatggccgagatttcacttcgtcatggcattgccctcgatgcg
agccgacgagcagaacgtggcatcaccgagcggccgatcacttatgcccaatatcggcgc
cttgagcgggagcaggctcgccaaatccgtttcgaagacgcggatttggaacagtcgtcg
ccgcaaggagatcatccagaattcagccaacctttcgatacatccccatttgaagcatcc
gcgggcggaccggaggacatgcctcggcccaacaatcggcagaatgagtcgcaagttcat
ctccaggagccagctggtgtcagcaacgaagccggtgtccttgtgcgggttgcattggag
acggagcgccttgctcaaccattcgtttccgaaaccattctcgcggacgacatagggagc
ggctcttcgcgtgttgccgagggccgtgtggagagcgcaaaccgcactcccgatattcct
cgcgcagcaactgaagctgccacgcacacgacacacgaccggcagcggcgtgcaaagcgt
cctcatgatgacgacggagggccgagtggagcaaaacgtgtgacattggaaggcatcgcg
gttgggccccaggcgaacgccggcgaacaggatggcagtagtggccccttagtacggcaa
gctggaacgtctcggccatctccaccgacggccacgacgcgggccagcaccgcaaccgat
tcattgtctgctacagcccacctccagcaacggagaggtgtcccttcaaagcgtccgcgt
gaagatgatgatggagaaccgagtgaacgcaaacgcgagagagatgagcgcagcaaggac
gggcgtgggggaaataggagatag

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