Luidia clathrata (European starfish): 117287740
Help
Entry
117287740 CDS
T10152
Name
(RefSeq) exosome complex component CSL4-like
KO
K07573
exosome complex component CSL4
Organism
arun Luidia clathrata (European starfish)
Pathway
arun03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
arun03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
117287740
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
117287740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
PCB_OB
Motif
Other DBs
NCBI-GeneID:
117287740
NCBI-ProteinID:
XP_033624134
LinkDB
All DBs
Position
3:3493585..3504281
Genome browser
AA seq
197 aa
AA seq
DB search
MAAPTVCIPGQRLGSAEEYQSGRGTVTRQGFIYSSLAGIQHEEKKGEDLPEIQVLLEDQQ
TMVPEVGSVVTAKVVNVNPRFCRCAIMGVERTQLTQSFRGMIRKEDIRATEKDKIEVYKS
FRPGDVVLARILSLGDAQSYLLSTAENELGVVLAQSEAGVNMIPISWCEMVCPKSHAKEY
RKVARVQSQHIIQPSGT
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atggcagcccccacggtgtgcattcctggacagcgtcttggaagtgctgaagaatatcaa
tctgggagaggaacagttacaagacaaggtttcatctactcgagtctggctggtattcaa
catgaagagaaaaagggagaagatcttcctgaaatacaagttcttctggaagatcaacaa
accatggtgccagaagtaggttctgttgtcacagctaaggtagtgaatgtgaaccctcgg
ttctgtcgctgtgccatcatgggggtagagcgcactcaactcacccaaagcttcagaggg
atgatacgcaaagaagacataagagccacggagaaagataaaatagaggtgtacaagtcc
ttcaggcctggagatgtggtccttgcaagaattctgtctttgggtgatgctcagtcgtat
ctcttgtcgactgctgagaatgagctaggggttgtcctcgctcagagcgaagctggtgtg
aatatgatcccgatcagctggtgtgagatggtgtgcccgaagtcccacgctaaggagtac
cgcaaagtagctagggtacaatcgcagcacatcatacaaccttctggtacatag
DBGET
integrated database retrieval system
