Luidia clathrata (European starfish): 117287867
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Entry
117287867 CDS
T10152
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic-like isoform X1
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
arun Luidia clathrata (European starfish)
Pathway
arun00450
Selenocompound metabolism
arun00970
Aminoacyl-tRNA biosynthesis
arun01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
117287867
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117287867
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
arun01007
]
117287867
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
arun03016
]
117287867
Enzymes [BR:
arun01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
117287867
Amino acid related enzymes [BR:
arun01007
]
Aminoacyl-tRNA synthetase
Class I (U)
117287867
Transfer RNA biogenesis [BR:
arun03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
117287867
Prokaryotic type
Other AARSs
117287867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
GST_N_5
WHEP-TRS
Anticodon_3
tRNA-synt_1
GST_C_3
GST_C
GST_C_6
GST_C_2
GST_N_4
Arc1p_N_like
GST_N_2
DZR_2
Motif
Other DBs
NCBI-GeneID:
117287867
NCBI-ProteinID:
XP_033624322
LinkDB
All DBs
Position
3:complement(10292982..10316759)
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AA seq
916 aa
AA seq
DB search
MILLTDKGNQHSLKAIVAATLAGVALDVTIVDSTDQVVPHLRKNRLPVLDLGGGVLIFSS
NSICRYLLAQGGLDTDDIQVEEWLEWEATQLQPILGPFMASVFGGSKVDSEILKPLLTYL
NTSLQGKEYLVKNKLCAADISIWAALYPAQVSKPDLLSAYPNVASWVQNLGAQSAFQRGV
STVTNDKGAGSFKVSVLAQPIVQRPSTDARSAKEEEPGTAEVVTADEIKYAKEAWLHGRT
TMPSPRQRNHPLLPEKGLHNVLITSALPYVNNVPHLGNIIGCVLSADVFSRFCRLRNYNS
LYICGTDEYGTATETKALAEGLTPQQICDKYYRIHKDIYDWFSIDFDYFGRTTTKQQTEI
AQDIFLRLHERKFLVKDTVEQLLCEKCSRFLADRFVEGICPLCNYPDARGDQCDKCGKLI
NATELKNPRCKVCSSSPVIKTSEHLFLDLPKLEPQLQKFFNKSSSEGDWTSNAKLITSSW
IRDGLKPRCITRDLKWGTPVPLDGFRDKVFYVWFDAPIGYPSITANYTDKWEKWWKNPQE
VQMYNFMAKDNVPFHSVVFPCTLLGAEDNYTLVNHLVATEYLNYEDGKFSKSRGVGVFGD
MAKDTGIPSDIWRFYLLYVRPETMDSTFSWTDLVLKNNSELLNNLGNFINRGLTFLEKNF
GSVLPKMILESEDEQLLALVTRELKNYKELLEKSKIRDALRHILNISRLGNQHIQASQPW
VLVKGGEKERIRAGTVIGLCANISCLLSTMLLPYMPVTSSTIQQQLNASSECNVITDKFV
CCLETGHKIGTPKPLFEKLDQAHIEQLKKKFGGQQQQQQQQNDSKDVKAEPVKAQTPNKP
GQPQGVDAEAVKRLTDEVTKQGDAVRKLKTAKAEKSAIDAEVKKLLSLKQQLAAASGQSA
TTPDSSKGKKKKGGKK
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgattcttttgacagataaagggaaccagcatagcctgaaagctattgttgcggcaaca
ctagcaggagtagctcttgatgtaacaatcgtagacagtacagaccaagttgttccacat
ttgaggaaaaaccgactcccagttcttgacctaggtggaggagtactgatattctcatca
aatagtatttgtagatacttgcttgcccagggtggtttggatacggatgacatacaggta
gaagagtggctggaatgggaggctacacaactacagcctattctaggaccgttcatggcc
tctgtgtttggtggcagtaaggttgacagtgagatactgaaacctctcttgacatacctc
aatacctcactgcagggaaaagagtatctagtgaagaacaaactgtgtgcagcagacatc
agtatatgggcagctctgtacccagcacaagtctccaaaccagaccttctctcagcgtac
cccaatgtggcgtcttgggtccagaaccttggtgcccaaagtgcctttcaacgtggagtt
tctacggtgaccaacgataaaggagcggggagttttaaggtgtctgttctagcgcagccc
attgttcagaggccgtctactgatgctaggagtgctaaggaagaggagcctggtacggcg
gaggtcgtaacagctgatgagataaaatatgctaaagaggcgtggctgcatggaagaact
actatgccatccccaagacaaagaaatcaccctcttctaccagagaagggccttcataat
gttctcatcaccagtgcattgccttatgtcaacaatgtccctcatctgggtaacatcatt
gggtgtgtgctgagtgcagatgtcttctccaggttttgtcgtctgaggaactacaactct
ctgtacatctgtggcaccgatgagtatggaacggcgacggagactaaagcactagcagaa
gggcttacccctcagcagatatgcgacaagtattaccgcatacacaaagacatctatgac
tggttctctattgactttgattactttggaaggaccacgacaaaacaacagactgaaatt
gcacaggacatcttcctgaggttgcacgagaggaagtttctagtgaaggacacggtggag
caactcctatgcgagaaatgcagtcgcttcctcgctgatcggttcgttgagggaatttgc
ccgctctgtaattacccagatgcccggggtgatcagtgtgataaatgtgggaaattaatc
aacgctaccgagctcaagaacccaaggtgcaaggtgtgcagctcttcccccgtcatcaag
acctcagaacatctcttcttagatcttccaaagctagagcctcaactccagaagttcttc
aacaagtctagctcagaaggggactggacatctaacgctaagctcatcacatcctcctgg
attagggatggcctcaagcctcgatgtatcaccagggatcttaaatggggaacaccggtg
ccgctggacggcttcagagataaggtcttctacgtttggttcgatgcgcccatcgggtat
ccgtccattactgccaattatacagataagtgggagaaatggtggaagaatccacaagaa
gtgcagatgtataacttcatggcaaaggataacgtacccttccacagtgtagtatttcca
tgtacactacttggagctgaagataattacaccctagtcaaccaccttgttgcaacagaa
tatctgaactatgaagacggcaagttttccaagagccgtggtgttggcgtgtttggcgac
atggccaaggacactggcatccctagtgatatttggcgattctacctcttgtacgtacgg
ccagagaccatggatagtacgttcagttggactgatctagtgcttaagaacaacagcgag
ttattgaataatctgggtaacttcatcaacaggggtttgacatttctggagaagaacttt
ggcagcgtccttcctaagatgattctagaatcagaagatgagcaactacttgcgctggtc
acgagagagctgaaaaactacaaagagcttcttgagaagtctaagatccgagatgcactc
aggcatatcctcaacatctcacgcttgggtaaccagcatatacaagccagccagccgtgg
gtcttggttaagggtggtgagaaagagaggataagagctggcactgtgattggactgtgt
gctaatatctcctgcctgctctccaccatgctcttaccatacatgccagtaacaagcagt
actatacaacagcaactgaatgcttcttctgagtgcaatgttatcaccgacaagtttgtt
tgctgtctggagaccgggcacaagattggaacgcccaagccgttgtttgaaaagctggat
caggctcacattgaacaactcaagaaaaagtttggcggacaacaacaacaacaacaacaa
cagaacgactccaaagatgtcaaggcagaacctgtgaaagcacaaacaccgaataagccc
ggtcagccacagggagtagatgctgaagcggtcaaacgattgaccgatgaagtgaccaaa
cagggggatgccgtacgcaagctgaagacggccaaggcagagaaatcagcaattgatgca
gaggttaagaaactactgtccctcaagcaacagttagctgcagcgtcaggtcagagcgcg
accacacccgactcctccaaagggaagaagaagaaaggaggcaagaagtaa
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