Luidia clathrata (European starfish): 117288339
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Entry
117288339 CDS
T10152
Name
(RefSeq) ATP-dependent RNA helicase DHX29-like
KO
K18995
ATP-dependent RNA helicase DHX29 [EC:
5.6.2.6
]
Organism
arun Luidia clathrata (European starfish)
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
arun03012
]
117288339
Enzymes [BR:
arun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117288339
Translation factors [BR:
arun03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
117288339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_DHX29
OB_NTP_bind
DEAD
Helicase_C
HA2_C
DSRM_DHX29
AAA_22
AAA_19
FtsK_SpoIIIE
HA2_N
nSTAND1
NPHP3_N
nSTAND3
AAA_16
Motif
Other DBs
NCBI-GeneID:
117288339
NCBI-ProteinID:
XP_033625049
LinkDB
All DBs
Position
3:complement(9820425..9860675)
Genome browser
AA seq
1391 aa
AA seq
DB search
MGKKKNKAPKPIASVSVPSKKNVEGGSDAKTATVQKNYRFQEPDGSADAVKPNDKKVIKV
SLPADLEKAILEEILKQQKTSKQQGIVSKKMSAKKLTDLYMALAVVGFTHDQITAAMSNN
LVQGGDLHSALDWLCLNLPDNELPAGFAGTFLEEDRQEMKDKVRKTFMEDQAGKREGGKQ
RKKEKKPVQEESQKDPKVNVKNWILQYAEAYSEDEEEDKTPESIQQEEVDPTERYLALMA
KLMDAKMAAGQAKEEGNKVMQTQTGKEIARLARDLTKVEKHPDFDPRVKIESLERDQSQD
GADGGVVFAPVKKKKPKKKKDDEVEDEGMFNLFAEEVDSSKKTAASNTTVPQDDIRSFAY
SQKNWTAKSPKQFLIDWCRKNIPNSAAPKYHKKEVRGNWKCKLTVDRKKDPPLVVCPEIL
TENSMEAQHLASVLALWNLAKTASIHQLLPPPYRDVWLEWRDAENKAKEEVKIEENKPRD
QFVSQLLKKLKLQSQTEGAFTDQGKGDSDEDIEDSWEDHAGNVTVKENTDQQKRSKAPSM
LGTKHMVGGDTLRTIMQTRQKSAAYHKMLVSRQTLPVYQHRDAIVNQLKTSPVVIVAGET
GSGKSTQVPQFLLEDLIMSGAGGHSSIVCTEPRRISATSLARRVSQEMAERGPGTKESMC
GYQIRMESQQCHTTRLLYCTTGVLLRKLQLDPKLQDISHIIVDEVHERSVQSDFLLIILK
TLLKVRRDLRVILMSATIESAKLSAYFHHCPVVNIPGRTFPVQVFHVEDVIENTNYVLDG
DSPYAVRYESLTQEEHTTVSITGKAGQSRDVHVSWEIQDISVMDESGLDPDLYSKRTRQV
VTRLNQDRINMDLIVELISFLDQDPLYGGIDGAILIFMPGLANIQELYELLQTDSRFPEK
KYQILALHSVLSSEDQSSAFGIPPSGVRKVVIATNIAETGITIPDVVFVIDAGKVKETRY
NEMSQLSALVETNISKASAKQRQGRAGRVREGFCFRLYTKQQYESFKSFSPPEILRVPLE
DLCLHIMKCDLGSPEAFLQQSMDPPQLNTIRAAMSLLREVGACKVDDPTLTPLGQHLAAL
PVNVRVGKMLLFAAMFGCLEPVAVMAAAMTDKQPFVVPMGKRQQADLAKKALAIADSDHI
TVYKVFAGWEEAIARGKVSEMSYCHQNFLSRTTLLSIKDVKNDLIRLIQSIGFEDGLRRP
DEAGIKSPVTSDGVLEISKARVKGPKFPLTQGNLALLKAVLTAGLYPNVAKTSYEKPLEG
ARETKKLCVAETTKGPVAVHPASVNKGLLTNGWLLFLEKVKLSRVFIRDSSLVSPYPLLL
FGGALAVQHREKVISVDDWIKFQAPAKTAVIFKELRNLLNLMLIKKLSQPSLHIQDEKII
QILMELIQSER
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaaagaagaataaagccccgaaaccaattgcatccgtaagtgttcctagcaag
aagaatgtggaaggcgggagtgatgcaaaaacagccacagttcaaaagaactacagattt
caagagcccgatggcagtgcggatgcagttaaacccaatgacaagaaggttattaaggtt
tccttaccagccgatttagagaaagcaatattggaggagattcttaaacagcagaagacc
tccaaacagcaaggaattgtctctaagaagatgtctgccaagaagctgacagatctttac
atggctttggctgtggtgggtttcacgcatgaccagatcaccgcggcgatgagtaataac
ctcgtccaaggaggagacctacactcggctctcgattggttgtgcctcaacctaccggac
aacgagctcccagcagggtttgccggtactttcctcgaggaagatagacaggaaatgaag
gataaggtcaggaaaacatttatggaagaccaggctggaaaaagagaaggtggaaaacaa
aggaaaaaggaaaagaaaccagtgcaggaggaaagccagaaagacccaaaggtgaatgta
aagaactggatcttgcaatacgctgaggcatacagtgaggatgaggaagaggataagaca
ccagaatccatccaacaggaggaggttgacccaacggagcgatacctggctctgatggcc
aaactcatggatgctaagatggcagccggtcaagcaaaggaagaaggcaacaaggtcatg
cagactcagactggcaaggagattgccagactagcaagagaccttacaaaggtggagaag
caccctgactttgacccaagagtcaagatagaaagtctagagagggaccagtctcaagac
ggtgcagatggaggagttgtctttgctccagtcaagaagaagaaaccaaagaagaagaag
gacgatgaggttgaagacgaggggatgtttaatctatttgccgaggaagtggattcatcc
aagaaaacagcagcatcaaacaccactgtcccacaggatgacatacgaagcttcgcctac
agtcagaaaaactggacagcgaagtcgccaaagcagttcctgatcgactggtgccgaaaa
aatattccaaactctgctgctccaaagtatcacaagaaagaggtcaggggaaactggaag
tgcaagttaaccgtcgaccgtaagaaggatcctccattggttgtatgtccagagatttta
acagagaactcaatggaagctcagcatctagctagtgtcttagctctctggaaccttgct
aaaacagcgtccatccatcaactactaccacctccttacagggatgtatggcttgagtgg
agagatgcagaaaacaaagctaaggaggaagtcaagattgaagaaaataagccaagagac
cagtttgtctcacagctcctgaagaaactcaagttgcaatcacagacagagggggccttc
actgaccagggtaaaggagacagtgatgaggacattgaagactcgtgggaagatcatgct
gggaatgtgactgtaaaggaaaacactgaccaacagaaacgatcaaaagcgccctcgatg
ttaggtacgaaacacatggttggtggagacactctgcgcaccattatgcagacaagacaa
aaatcagcagcgtaccataagatgttggtatctcgccaaaccctaccggtataccagcat
cgtgacgccatcgtcaatcaactcaagaccagtccggtggtcattgtggcaggggaaact
gggagcgggaagagcacacaggttccacagtttttacttgaggatttaataatgtccgga
gccggaggtcacagtagtattgtatgcacagagccaaggaggatatcagcaactagctta
gcgagaagggtctctcaagaaatggctgagagaggtcccggcaccaaggaatccatgtgt
ggttatcagatacgtatggagtcccagcaatgccatacaactcgcttactttactgtacc
acgggggtgctcctacgtaaattacaactggatcccaaactgcaggatatcagccatatc
atagtggatgaggtacatgagcgcagtgtacagtcagacttcttactgatcatcctgaag
actctactcaaggttcggagagaccttcgtgtgatcctgatgagtgccaccatagagagt
gctaagctttctgcttacttccatcactgcccggtggttaatataccgggcaggacattc
ccagtacaggtgtttcatgtagaagatgtgattgagaacaccaactacgtgttggatggt
gactctccctacgcagtacgatacgagtctcttacacaagaagaacacaccactgtgtct
ataacaggcaaggctggccagtctagagatgtccatgtaagctgggaaatacaagacatc
tcagtcatggatgagagtggtttggacccagacctctacagtaagcgtacaaggcaggtt
gttaccagactaaaccaagacagaattaacatggacttaattgtggaactgatcagcttc
ttagatcaagaccccctgtatggaggcatagacggtgccattcttatattcatgcctgga
ctcgctaacattcaagaactttacgaactccttcagactgattccagattcccagagaaa
aaataccaaattctagccttacattctgtgctgtcctccgaagatcagagctcagcgttt
ggaataccgccctcgggggtgcgtaaggttgtcatagcaacaaacatagcagagacggga
atcactattcctgatgttgtgtttgtgatcgacgccgggaaagtaaaagaaacaaggtac
aatgagatgagtcaactgagtgccctggtggagactaacatcagcaaggccagtgctaag
caaagacaaggccgagctggtagggttagagagggattctgcttcaggctctacaccaaa
cagcagtacgagtctttcaagtcattttctccgcctgagattctacgagttccactggaa
gatctttgcttgcacatcatgaaatgtgaccttggttcacccgaggcattcttgcagcaa
tccatggacccacctcagctcaacacaatccgggctgccatgagccttctgagggaggtt
ggggcatgtaaggtcgatgaccccacattgacccctctcggccagcacctagcagccctg
cctgtcaacgtccgcgtcggtaagatgctgctctttgctgccatgtttggatgcttggag
ccagttgctgtgatggcagctgcaatgactgataaacaaccctttgttgttccgatgggt
aaacgacaacaagctgatctagctaagaaggccttggctatagctgactcagatcacatc
acagtctacaaggtcttcgctggttgggaagaggctattgccagggggaaggtctcggag
atgtcctactgtcatcagaatttcttgagtagaactacacttctctcaatcaaggatgtg
aagaatgatctgatccgattaatccaatccataggatttgaagacggcttaaggcgtcct
gacgaagcagggatcaagtccccagtcacctcggacggcgtcctagaaataagtaaggct
cgagtcaagggacccaaattccctctcactcagggaaaccttgcactcctcaaggctgta
ctcactgctggcctgtacccaaatgttgccaagacgtcttacgaaaagccgctggagggt
gcacgggagaccaagaaactctgcgtggctgagacgaccaagggtccggtggctgtgcat
ccagcttctgttaacaaaggtctactcactaatggttggctactgttccttgagaaggtg
aagttgtctcgtgtattcatacgagatagttctttagtctcaccatatccactcttgtta
tttggtggtgctctggctgtacaacacagggagaaagtcatcagtgtagatgactggatc
aaatttcaggcaccagccaagacggctgtaatatttaaagagctacgcaatctactcaat
ttgatgttaataaagaagctgtctcaacctagtttacatatacaagatgaaaagatcatc
cagattctaatggagctcatccaatcagagaggtga
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