Luidia clathrata (European starfish): 117288370
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Entry
117288370 CDS
T10152
Name
(RefSeq) TOX high mobility group box family member 2-like
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
arun Luidia clathrata (European starfish)
Pathway
arun03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
arun03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117288370
Chromosome and associated proteins [BR:
arun03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117288370
PBAF complex
117288370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
DUF596
GCN5L1
CENPH
DUF3978
HMG_WDHD1
Pox_F11
Motif
Other DBs
NCBI-GeneID:
117288370
NCBI-ProteinID:
XP_033625099
LinkDB
All DBs
Position
3:18403105..18411678
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AA seq
559 aa
AA seq
DB search
MSAMKRAFSGSIGTPPPSHGRSHSSQPSQPVVANYPSFNAGKVGSPGKSSSHEARVPKPP
KPPDKPLMPYMRYSRSVWDKVKQENGDLKLWEIGKIIGQMWRELPEEQKQIFTEDYENEK
VDYTNNMKIYHNSPAYQAWVVAKGKVQQQQEQEAKEPRPKPEPRMSIQPAEDEDDQDDGF
SVKHIAAARYQRNHRFVNDIFSDAAVPDPRSVVTESRMQVLKRQVQSLMLHQKKLENELM
QIEEKHESKKRKFFETSDQFHSSIKKLCDQKVEIKWDELPPPDIPLPPLPPPMGSILSHA
LQRPTMGPASLLPTLPPMVPTQVHVHPSPVPQVEPQPIAPTASSELGPPPGSQPGSEPGS
QPGTAPESQPGSQTALEQQSPEQPSLTGQPNGEQEPKKEELKKEGSMEVDEQKEDSNNET
STLQSVCPPPKTDGGESESNQDPETQKPSNLDAHPPPLIKDAVEQPTQEPSQPSQLPADA
VSHTAPEEEKKMDNPAESTEVLKAPAVPEDKIESGGKEVKTGPEEQVGGGEKDDKEVGPQ
EEKAEESSKDGVMAGKETQ
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaatgaagcgagccttctctgggagcattggaactccgcctccttcacatgga
cgttcccattcatcccagccatcccagccagtggttgccaattacccatcattcaatgca
ggaaaggtcggcagtccgggaaaatcgtccagtcatgaggcacgcgtccccaagccaccc
aagcctccagacaagcccctcatgccgtacatgcgctacagtcgcagcgtgtgggacaag
gtcaagcaagagaatggcgacctcaaactgtgggagatcggaaagattatcggccagatg
tggagagagctgccggaggagcagaaacagatctttactgaagactacgagaatgagaag
gtggactatacaaacaacatgaagatttaccacaactcaccagcctatcaagcttgggtc
gttgccaaaggaaaagttcaacagcagcaggagcaagaagcgaaggagccaagacccaag
ccagaaccccggatgagcatccaaccagccgaagatgaagatgatcaagatgacggcttc
tcagtgaagcacattgctgctgcgcgataccagcgcaatcatcgatttgtcaacgatatc
ttcagcgatgccgccgtaccagaccctcgttctgtcgtgaccgagtctcgcatgcaagtg
ttgaagcgacaggttcagtccttgatgctacatcagaaaaaattggagaatgagctgatg
cagattgaggaaaaacatgaaagtaagaaaaggaagttcttcgaaaccagcgatcagttt
cactcctcgattaagaagctgtgtgatcagaaagttgagataaagtgggacgagcttcca
ccccctgacattccccttcctcccctgccaccgcccatggggagtatcctgagccacgcc
cttcagcgacccaccatgggaccagcgtctctcttaccaacactcccaccaatggtaccc
acacaggtacacgttcatcccagtccggtgccacaggtcgaaccacaaccaatagcccca
actgcgtcgtcagagctggggccaccaccggggtcgcagccggggtcagagcccgggtca
caaccggggacagcacccgagtcacagcccgggtcacagacagccctggaacagcaatca
ccagagcagccttcattgactggacagcctaacggggagcaggaaccaaagaaagaagag
ctgaagaaggaggggtcaatggaagttgatgaacagaaggaagattccaacaacgaaacc
tccaccctccagagtgtttgtccgcctcccaaaactgatggaggagagagtgaaagcaat
caagacccagagacgcagaaaccatccaacctagacgctcatccaccgcccttgatcaaa
gacgctgtggagcaaccgactcaagagccctctcaacccagccaactcccagcggatgca
gtctcccacactgcccctgaagaggagaagaagatggacaatccagcagagtcaactgag
gtcttgaaagctccagcggtacctgaagataagatagagagtggtggcaaggaggtcaag
acggggcctgaggagcaggttggaggtggtgagaaggatgataaggaggtgggaccgcag
gaagagaaagctgaggagagttcaaaggatggagttatggcggggaaagaaacacaatag
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integrated database retrieval system
