Luidia clathrata (European starfish): 117288551
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Entry
117288551 CDS
T10152
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
arun Luidia clathrata (European starfish)
Pathway
arun04140
Autophagy - animal
arun04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117288551
04148 Efferocytosis
117288551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arun04131
]
117288551
Membrane trafficking [BR:
arun04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
117288551
Hops complex
117288551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
TraF_2
Beta-prop_WDR19_1st
TFIIA_gamma_N
Motif
Other DBs
NCBI-GeneID:
117288551
NCBI-ProteinID:
XP_033625342
LinkDB
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Position
3:complement(20765530..20785485)
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AA seq
830 aa
AA seq
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MAHITGDWNPLGEVFYRKLELYSMDRSWQEVADLKKFKVAAAPYGGPIALVRDDSKTGVR
GSTRPTVYIYTSSGREISQFRWDSGQLLQMGWSSREDLLCVQDDGTVLVYDIFGTFQRNF
SLGQEARDTKVLECKIFQGFVGTGLAILTGSYRFFVINNIDDPHSRKMVEVPGLDCPPSS
WSIICRDRHTQILLAKERQLFLLDYTDVHEQMLETRSNVNSFIEMAVSFDNRLLALFADT
GLLWIGSSDLQKCYCEFDTKSQMRPKQLAWCGTGAVVGYWENLLLVIGPHKDWIKFNMDS
DAYLVPEADGVRIVDTHTHELLQRVPVVVEEIFKIGSMAPGAMLFEASKEFQKESQKADE
YIRMVKDQLSLAVDQTIEAAGCEYEPATQRMLLRAASFGKCFLTNLNPEKFVNMCKLLRV
LNSVREYHVGVPLSYEQLKRLTLPVLIDRLILRRQWCLAMHISRFLKLPEADGESRILAH
WACYKVLQKHIADERIAQDIKSKLDTTPGIAYSEIAKKASECGRTQLAVRLLEYEPRAAE
QVPLLMTMRDQKVALIKAIESGDTDLVYMVLLQMKETMPMGDFLMSLRNHPMAQSLFMQF
CREQNPALLSDLHYQNDDFQEMGNCQVAESFQTSDMRQKLDKLNQAQDSYTKARNELAAK
AAEEQAKLLGYQQKLEEQYKVTYIGKTLHDTMHELISKNMSKLAEQLRKEFKVPDKRFWW
MKVDALASAGDWLELERFAKSKKSPIGYEPFVEVCMKHANKYEANKYIGRVTAEHKVKMY
IRMGSLEEAADLAFQQRNEEDLNLVLRQSIGNRTLSAKIQSMKAQLVAKR
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacattactggtgattggaaccccttaggggaggtgttttaccggaagttggag
ctgtacagtatggaccgaagctggcaagaggtcgctgaccttaagaagttcaaggtggct
gccgccccctacggaggacccatcgcacttgttcgtgatgacagtaagacaggagtccga
ggttccacccgcccaactgtctacatctatacatcatctggaagagaaatctcacagttt
aggtgggatagtggccagttgttgcaaatgggatggtcaagtagagaagatcttctctgc
gtacaagacgacggaaccgtcttagtgtacgacatcttcggaactttccagagaaacttc
agtcttggtcaggaggcacgtgacaccaaggtcttggagtgcaagatcttccagggattc
gtgggtacgggtcttgccattctcactggaagctatcgattctttgtcatcaataacatt
gacgaccctcatagccgtaaaatggttgaagtgccaggtctagactgtcctcccagtagt
tggtccatcatctgccgagacagacacacccagattcttcttgccaaagaaagacaatta
ttcctcctggactacacagatgtacatgaacagatgctagaaacaagaagtaacgtcaac
tctttcattgagatggccgtctcgtttgataaccgtctcctagctctctttgctgacact
ggacttctgtggattggttcctctgatcttcagaaatgttactgtgagtttgacacaaag
agtcagatgagacccaagcagttagcatggtgcggcaccggagcggtggtcggctactgg
gagaacctccttctggtcatcggtcctcacaaagactggatcaaattcaacatggacagt
gatgcctacctggtaccagaagcagatggagtacgtatcgttgacactcacactcacgag
ttactgcaacgagtaccagttgttgtggaggagatttttaagattggttccatggcaccc
ggtgcgatgctctttgaggcatctaaggagtttcagaaagaaagtcagaaagctgatgag
tatatccggatggtgaaggaccagctctcattggccgttgatcagactattgaagcagcg
gggtgtgagtacgaacccgcaacgcaacgaatgcttcttagggctgcttccttcggcaag
tgtttcttgaccaacttgaatccagagaagtttgtcaatatgtgtaaattactgagagtt
ctcaactcggtgagggagtaccacgttggagttccactcagctatgaacaactcaaacgg
ttgactctaccagtgttaatcgacaggttgatcctgcgacgtcagtggtgtctcgccatg
cacatcagtcgcttcttgaaactacctgaggctgatggagagagtagaatactcgcacac
tgggcttgctacaaggtattgcagaagcatatagcggacgaaaggatagctcaagatata
aagagtaagcttgacaccacgccagggattgcttactctgagattgctaagaaggcttcg
gaatgtgggcgtacccaacttgccgtcaggcttctggaatatgaacctcgagcagctgaa
caagtccctctgttgatgacgatgagagaccaaaaagttgctcttattaaagcaatagag
agtggtgatactgacttagtgtacatggttctactccagatgaaagagacgatgccaatg
ggtgatttcctcatgtcactcagaaaccatccaatggcacagagcctctttatgcagttt
tgtcgagaacagaacccagcccttttgtcagatcttcactatcaaaacgatgacttccag
gagatgggaaactgtcaagtcgcagaaagtttccagacttcagatatgaggcagaagtta
gacaaactcaaccaagctcaagatagctacaccaaggcaaggaatgaactagcagcaaag
gcagctgaagagcaagctaaacttcttggttatcaacagaagttagaggagcagtataaa
gtgacgtatataggcaagacgttacacgacaccatgcatgaactgatctctaagaatatg
agcaagttagccgagcaactcagaaaagaattcaaagttccagacaagaggttctggtgg
atgaaggttgatgctttagccagcgctggtgattggttagaactagagaggtttgcaaag
agtaagaagtcaccaatcggatatgagccgtttgttgaagtctgtatgaagcacgccaac
aagtacgaggccaataagtacatcgggagagtcactgcagaacacaaagtcaagatgtac
atacgtatgggatcgcttgaagaagctgctgatttagcgttccagcaacgcaacgaggaa
gacttgaacctggtactgcgtcagagcattggtaaccgaactctaagcgctaagatccaa
agcatgaaggcacagttggtcgcaaagaggtga
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