KEGG   Luidia clathrata (European starfish): 117288988
Entry
117288988         CDS       T10152                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
arun  Luidia clathrata (European starfish)
Pathway
arun03020  RNA polymerase
arun03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:arun00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    117288988
  09124 Replication and repair
   03420 Nucleotide excision repair
    117288988
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:arun03021]
    117288988
   03019 Messenger RNA biogenesis [BR:arun03019]
    117288988
   03400 DNA repair and recombination proteins [BR:arun03400]
    117288988
Transcription machinery [BR:arun03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     117288988
Messenger RNA biogenesis [BR:arun03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     117288988
DNA repair and recombination proteins [BR:arun03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      117288988
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N RNA_pol_Rbc25
Other DBs
NCBI-GeneID: 117288988
NCBI-ProteinID: XP_033625761
LinkDB
Position
1:8476797..8482630
AA seq 205 aa
MRLDNCLECAHVNCTVALVPSFSLKFHPTHRNKMFYHISLEHEILLHPQYFGPNLLNTVK
KKLFTEVEGTCTGKYGFVIAVTTIDNIGAGLILPSRGFVRYPIKYKAIVFRPFKGEVVDA
VVTQVNKVGLFTEIGPLSCFISKHSIPADMEFDPNSIPPCYKTKDEDVVIQQDDEIRLKI
VGTRVDASDIFAIGTLMDDYLGLVS
NT seq 618 nt   +upstreamnt  +downstreamnt
atgcgtttagacaattgcttggaatgcgcgcatgttaactgtacagtggcgctagttcca
agtttttctctcaagtttcaccccacacacaggaacaaaatgttttatcatatatcctta
gagcatgaaattcttcttcatccccaatactttgggcccaacttgctgaatactgtcaaa
aagaaactgttcacagaggttgaaggaacatgtactggaaagtatggctttgtaattgcc
gtgacgacaatcgataacatcggggctgggttaatacttcccagtcgagggtttgtcaga
tatccaatcaagtacaaagccattgtcttcagacccttcaaaggggaagttgttgatgca
gtcgtcacacaagtcaacaaggttggtcttttcactgagattgggccgctatcatgtttc
atctcaaaacattccattccagcagacatggagtttgatcccaattccattccaccatgt
tacaagacaaaagatgaggatgttgttatacagcaggatgatgaaatcagactcaagata
gtcggaacgagggtagatgcatctgatatatttgcaatcggcaccctgatggacgactac
ctaggtctcgtcagctag

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