Luidia clathrata (European starfish): 117289058
Help
Entry
117289058 CDS
T10152
Name
(RefSeq) E3 ubiquitin-protein ligase RNF31-like
Organism
arun Luidia clathrata (European starfish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_HOIP
E3_UbLigase_RBR
IBR_1
IBR
PUB
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
117289058
NCBI-ProteinID:
XP_033625878
LinkDB
All DBs
Position
4:complement(13976185..14017627)
Genome browser
AA seq
1618 aa
AA seq
DB search
MDTPCTTAAALQRPSVLVPKQEEPIATAVDSKYANLDNKVLETVKELHVQLEILLKTIPL
DESRIQTTLDTIVSQNCPLPAKFSRIDVSDLLKKNKNIRGEESLKILVSALGLLEKYGRN
LLRPKRPTLWKCIFFANSVFRTRVDIIKGARHILQLMGYSEVVEDGLSFPTDSESADPDV
VANITADLAIAKTEIDMYHLKQHPYPYRIKDCLDGTMTMIQIPGDSPSGTPKSFFVRRPE
EGRATIYENVPNQSQPFPTRNPPNNIQLKQSQAPVIASKPQHYAFSENVFSNNDGIVSKI
GNLASKGSQVPGNKGFGYFAQNPECVVTVKDSTQEINPQPAKQTSAVVHVRGQADQMKAT
DSEETECVMCGKKTANMQCPTCPGLRCESCDRQWHIHPSRRSHQRNQIEASPVPVSFPPI
IFCNVCGTEPATVLCNNCSSSFCGQHDVLFHNHPQRGNHVRQLLSIEPQIPTAESPPPKN
IVLSPVDTPLSQSTQDSSRTPESSSRSGSTKKRPVPAPRTSVKKSNKSDSSQPNLSPVEG
SKFDDDVFNGQAKPAYADLKVQAREITRTQSDTMPIKTKTAPSSNPEPFYSLPANTNNVT
ALLENVVKRDIAVLQKIRGLRSAITTEGLAVEGSLKAEERHLLAEHTLLLKKQKELEESM
KGLGLSSSTEEVEVVRKDPVASKESHVKPSPRSVAQDVIPTTPVKTVGAAVNLDEVSRQT
VQKTQAVPTPTRRRSTSPPVPQKPNFASKSQHAEQRHSPADSTPLEAQSGSVSTPSADVY
KPPQVSPRPQLSATGPGRVQQLATNIRLTTPAGNNNSVRLEAWFCPQCGDHNTSLQCLRC
KTQMPLSSNTGPSVAALGQQLGSAIPVGVPQTLAKPSVKMQRDVQPPQGWVDSQIGDSQQ
STAGATVGAAATAGDKPQPLHNFFLLQQLDEIAVEKQRAKEEDERNQAREKEEVIMTQTG
LFITPRSRKLRTMVSPDPPAAGPTKKQPILNQVAAAGLAQVIRTEDRRRLDEQWAQSLAY
IKLLQDAEDCGFLPEDVMVATESINRTGGQQGQELQWLQSNWEDYIYTVVAMSTNHLKNE
VGQSVGVVTSQEAMMALRKHYGCVEKAVEECVGAVQRRVLSLVDLGFDYQRVYESLADVE
GKTDDALIRLNKGLAKGFADRIWQEDNEDLDTQERVILNHGAEDRLVTVNRRLRLLLADY
ELPSWGRAETAARLIDTRKYATEDAIIAARECGDFQRATQYLEKTCSICYTEFPMNKLNT
LINCQCTICLECLQNHFTVVVRDRNILNATCPACDMPDLREGEVDAMSDYFGFLDMLLKG
FLDEATYGLFQNKLLMWNLMKQDDFRWCSHCGNGFINEAPGRRKMRCPECNKLTCFQCKK
PWMDQHENITCDEFQAWKEANDPNAQLQGLAIHLKENGIDCPKCKMRYELAKGGCMHFKC
GMCTHEFCSGCNAPFKKDCRKFSNCLGKGLHAHHPRDCLFYLRDLDINTLKKHLKKHNID
YKRNHPASQEAVCTVMEQKEGPGGLADALCGRDTVRSGLCEIHYKEYLVSKMNQNRIDPA
DGFNIEGLCIILFRNNLPSPARADNEPEATYRERMLQEVKRNLPLEEKNPRDRSQSVN
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atggatacaccatgtacaactgcagcagctctgcagcggccaagcgtgttggtgccgaaa
caagaggagccaattgccaccgcggtcgattccaagtatgccaatctcgataacaaggtt
ttagagacggtgaaagagctccatgtgcaactcgaaatcctcctgaagaccattccattg
gatgagagtaggattcagacgaccctggacacaatagtttcacagaattgtcctcttccg
gccaaattttcacggatcgacgtgtctgatctcctgaagaagaacaagaatatcagagga
gaggaaagtttgaagattcttgtgtcggctctaggtctgctggagaagtacggacggaac
ttgctgagacccaaacgccccacgctatggaagtgtatcttctttgcgaatagtgtcttt
cggacgagggtggacattataaagggtgccagacacatattgcagcttatgggatactca
gaagtggtcgaggatggtttgagctttcctaccgattcagaatctgccgacccggacgtc
gttgccaacataaccgccgacctcgcgatcgccaagacggagatcgacatgtaccatctg
aagcagcacccttacccctaccgcatcaaggactgcctcgacggcaccatgaccatgatc
cagatcccgggcgactcgccctcgggcactccaaagtcgttctttgtgcgtcgcccggaa
gaggggcgggcgaccatctacgagaatgtccccaaccagtctcagccgttcccaacacgg
aatccaccaaacaacatccagttgaagcaatctcaagcgccggtcatcgcgagtaaaccc
cagcattacgcattctcggagaatgtcttctcaaacaatgatgggatcgtcagtaagatc
gggaatcttgcttctaagggcagccaggtgcccggtaataaaggctttgggtacttcgcc
cagaatccagagtgcgttgtaacagttaaggactcgacgcaggagatcaatccgcagcct
gctaagcagacaagtgctgtggttcatgtcaggggtcaggctgatcagatgaaggccacc
gactcagaggagactgagtgtgtcatgtgcggaaagaagacagccaacatgcagtgcccc
acatgtcccggcctacgctgtgagtcatgcgacagacagtggcacatccaccccagccgg
cgatcccaccagcgcaatcaaatagaagcaagtcccgtacctgtgtcatttcccccgatc
atcttctgcaacgtctgcggcacggagccggccacagtgctgtgcaacaactgcagcagt
agcttctgcgggcagcacgacgtgttgttccacaatcatccccagcgtgggaatcatgtc
agacagctgttgagtatcgagccacagattcccacggcggagagcccaccacctaagaat
atagtgctgtcacctgtagacactccgctgtcacaatcgacgcaagattcttcgaggacc
ccagagtcaagctcccgctctggaagtactaaaaaaagaccagttcctgctccgagaacc
tctgtgaaaaagtcaaataaaagtgattcatcacagccaaatttgagtccagtcgagggc
tccaaatttgatgacgatgtgttcaatgggcaagcaaagccagcctatgctgatctcaag
gtccaagccagggaaatcaccaggacacaatcagatacgatgcccatcaagaccaagaca
gcgccttcttccaacccggagcctttttactccctcccagcaaacactaacaatgtcaca
gccctgttggaaaatgtggtgaagagggacattgcagtcctccagaagatccgcggactc
cgatctgccatcaccacggaaggcttggcggtagagggctcgctgaaggctgaggagaga
cacctgctggcagaacacacattgcttctgaagaagcagaaagagttggaggaatccatg
aaggggttgggcttgagtagcagcacagaagaggtcgaggtggtgaggaaggacccagtg
gccagtaaagaatcccacgtcaaaccctcgcctagatcggtcgctcaagacgtcattcca
actaccccggttaagacagttggtgctgcggtaaacctggacgaggtgtcccgccagact
gttcaaaagacccaagcagtgcctactcctacgagacgtagatccacatctccaccggtg
cctcagaagcctaactttgcttcaaagtctcaacatgctgaacagaggcatagccctgca
gatagcacccccttagaggcacagtcagggtcagtatcaacaccttctgctgacgtttac
aaacccccgcaggtttctccgcgcccacaactctctgccaccggcccgggacgagtacag
caactcgccactaacataaggctgactaccccagctggcaacaacaactctgtccgactc
gaggcatggttttgcccccagtgtggcgaccacaacacatcgctacaatgcctacgctgc
aaaactcagatgcctctaagcagcaacacaggaccatccgtagcagcgttaggtcagcaa
ctcggatcggccattccagtaggggtgcctcaaaccttagcaaagccttctgtgaaaatg
caacgcgatgtgcaacctcctcaaggatgggttgatagtcagattggagatagtcaacag
tcaacagcaggtgctactgtaggtgctgcagctactgctggtgacaaaccacagccattg
cataatttctttcttctccaacagcttgatgagattgctgttgagaagcagagagcaaaa
gaagaagatgagaggaatcaagccagagagaaagaagaagtcatcatgacgcagacgggt
ctctttataacaccgcgatcaaggaaactgagaacgatggtcagcccagatccacctgca
gcaggtcccaccaaaaaacaaccgattctcaaccaagtagcagcagctgggttagcacaa
gtcatacggacggaagataggagaagacttgatgagcaatgggctcagagtctggcttat
attaaactactacaggatgcagaggactgtgggtttctaccagaggacgtcatggtggca
acagagtctataaacaggaccggcggccaacagggccaggaactccaatggctacagagt
aactgggaagattacatctacaccgttgtagctatgtccaccaatcatctgaagaatgag
gtcggccagagcgtaggggtggtgactagccaagaggccatgatggccctgaggaaacat
tacgggtgtgttgagaaggcagtggaggagtgtgtcggtgctgttcaaagaagggtcttg
agtctagtggacctggggttcgattatcagcgtgtctacgaatccctggccgatgttgaa
ggcaagacggacgatgctttgattcgactcaacaaagggctggcgaagggctttgccgat
cgtatctggcaagaagacaacgaagaccttgatactcaagaaagggtgattttaaaccac
ggggcggaggatcgactagtaacggtcaataggcgccttcgtctccttctagcggactac
gaacttcccagctggggtcgcgctgaaaccgcggcccgattgatcgatacaagaaagtac
gcgacggaggacgctatcatcgctgctcgggagtgtggagacttccagagagctacccag
tacttggaaaagacatgctcgatttgctacacggagtttcccatgaataagttaaacacc
ttgataaactgtcagtgcacgatctgcttggagtgtctccagaatcacttcaccgtagtg
gttcgtgatcgtaacatcctcaacgccacctgtccagcctgcgacatgccggacctgaga
gagggtgaggtcgacgccatgtcggactactttggattcttagatatgctgctgaaaggc
tttttggatgaagccacgtacggtttgttccagaataaactgctgatgtggaacctcatg
aagcaggatgacttcagatggtgttcacattgtggcaacggcttcatcaacgaagccccc
ggtcgacgtaaaatgcgttgcccagagtgcaacaaacttacgtgtttccagtgcaagaaa
ccgtggatggatcaacatgagaacataacctgtgatgaatttcaagcatggaaagaggcg
aatgatcccaacgcacagctccaagggttggccatacacctcaaggaaaatggaatcgat
tgtccaaaatgcaagatgaggtatgagttggcaaagggcggatgtatgcacttcaaatgt
ggcatgtgcactcatgagttttgtagcggctgcaatgctcctttcaaaaaggattgccgt
aagttttcaaattgtctaggtaagggccttcatgcccatcatcccagagattgtctcttt
tatcttcgagacctcgacatcaacacactcaaaaaacatctcaagaagcacaacattgac
tacaagcgaaaccatcccgctagtcaggaagcagtgtgtactgtcatggagcaaaaagag
gggccaggaggcctggcagacgccctctgtggccgggatactgtccgctctggtctttgc
gagatacactacaaggagtacttggtcagtaagatgaaccagaatcgcattgatcctgcc
gatgggtttaacatagagggtctatgcatcattctatttaggaataaccttccttcacca
gccagggcagataacgaacctgaggctacctacagggagaggatgctacaggaggtgaaa
agaaatctgcctctagaagagaagaatccaagagatagaagtcagtcggtaaattga
DBGET
integrated database retrieval system
