Luidia clathrata (European starfish): 117289129
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Entry
117289129 CDS
T10152
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16-like isoform X1
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
arun Luidia clathrata (European starfish)
Pathway
arun03040
Spliceosome
Brite
Enzymes [BR:
arun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117289129
Spliceosome [BR:
arun03041
]
Complex C
Other components
Step II factors
117289129
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GFIT
Other DBs
NCBI-GeneID:
117289129
NCBI-ProteinID:
XP_033625995
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Position
4:complement(17604136..17628522)
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AA seq
1253 aa
AA seq
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MSEDSSVHRLEGSSKQVGGLIIKKKPSSNDGTKSLSFKAPQPRSSLLGLDRLAAVKRREK
EELEDETKKRSKVTSYKDDWEDGDEDEEEEEEEEDEVERGSSQIASQKRQYRAPRIETPS
HPGGVSNAIMDRQKRREKESRKGGVYASSSSKDRERDDRRNRDRDRHRDRQRDGQSDRRR
DNDRDRRRGRDSERSNRSSVRSDRSGWEGTPSRDSEPGTPRISRGVVTPSRTSWEEDEDN
IPRKAPSNWDFPSPSGREGDRSERSYRGDRSERRGDRSSRSYESSRAKDSNRRESTRRPV
DDTPMMTPTHRYNSWATNRKRSGVTPQISGGDTAARFASDSDRQEWEEEQKRLDRQWYGN
DEGYDDSNNPFANIPEEYTQKREKELISKASKRMSAQQRQINKDNEKWETNRMLTSGVVT
RVEFDEELEEVNVKRIHLLVHNIVPPFLDGRIVFTKQPEPVVPVKDPTSDLAQVARKGSL
LVRKHREQKERKKAQHKDWELAGTKLGNIMGVEKKDEKEAEDVNYKSQQQFADHMKEKTQ
ASSDFALKKTLKQQREFLPIYATRNELLNVIRDNSVVIIVGETGSGKTTQLTQYLQEEGY
SNYGMIGCTQPRRVAAMSVAKRVSEEMGVTLGEEVGYAIRFEDVTCEKTVIKYMTDGILL
RESLRESDLDHYSAIIMDEAHERSLSTDVLFGLLREVVSRRQDMKLIVTSATMDSEKFAT
FFGNVPVFEIPGRTFPVDTLYSKTVVEDYVDASVKQAIQIHLQPTPGDILVFMPGQEDIE
VTCDVIAERLDELDDAPQLAILPIYSQLPSDLQAKIFQKAPDGVRKCVVATNIAETSLTV
DGIMFVVDAGYCKLKVYNPRIGMDALQVYPISQANARQRSGRAGRTGPGQCYRLYTERAY
KNELLTTTVPEIQRTNLANVVLLLKSLGVQELLQFHFMDPPPQDNMLNSMYQLWILGALD
NTGSLTSLGRQMVEFPLDPALSKMLIVAVDMGCSSEVLTIVSMLSIPSIFYRPKGREEES
DQAREKFAVPESDHLTYLNVYQQWKNNHYSSSWGNEHFIHVKAMRKVREVRQQLKDIMDQ
QGLKLISSGTGWDIIRKCICSAFFHQGAKLKGIGEYVNIRTGMPCHLHPTSALFGMGFTP
EYIIYHELIMTSKEYMQCVTAVDGEWLAELGPMFYSVKEAGKSRQANRQVAKASMTAMEE
EMQSATEELKARREYEEERRQSSVKRLQVSTPGRLEGKTPSSVRRKTPSSFGL
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagacagctcagtccatcgccttgagggctcttctaaacaagttgggggattg
atcatcaagaagaaaccctcgtcaaatgatggaacaaaaagcctgtctttcaaggctcca
caacctcgctcttccctccttggtctcgatcgtcttgcagccgtgaaaagacgggaaaaa
gaagaacttgaagatgagactaaaaaaagatccaaagtcacatcttacaaagatgattgg
gaagatggggatgaggatgaggaagaagaagaagaggaggaggatgaggtagaaagagga
agctcacagatagcatctcaaaaaaggcagtaccgagccccccgtattgagaccccttca
catcctggaggagttagcaatgccatcatggatagacagaaaagacgagagaaggagagt
cgtaagggtggagtttatgcctcctcttcctctaaggacagggagagagatgatcgaagg
aatagagatagagatagacatagagacagacaaagagatggacagagtgatagacgcaga
gacaatgatcgggatcgacgtagaggacgtgattcagaaaggagtaaccgcagcagtgtc
cgtagtgatagaagtggctgggagggaacacccagtagggatagtgaacctggaacacca
agaatatctagaggagtagtaacaccatccagaacaagctgggaagaagatgaagataac
attccaaggaaagctccttctaactgggacttcccatcgccttctggtagagaaggagat
cggagtgaaaggagttatcgaggtgatcgtagtgaacgtcgtggagatcgtagttcaaga
agttatgagtctagcagagcgaaggattcaaatagaagagagagtacaagacgtcctgta
gatgatacaccaatgatgacacctacacatagatataactcatgggcaactaacagaaaa
cgcagtggagttacaccacaaatatctggaggcgatacagcagcaagatttgcttctgat
tctgataggcaagaatgggaagaagaacagaagagattagatcgtcaatggtatggcaat
gacgaaggatacgatgattccaataatccatttgcaaacattcctgaagaatacactcag
aagagagagaaggaattaatcagcaaagcctctaagagaatgtctgcacaacaaagacag
attaataaggacaatgagaaatgggagaccaatcgtatgcttactagtggtgttgtaact
cgtgttgagtttgatgaagagttagaagaagtaaatgtaaagcgtattcatctcttagtt
cacaacatcgttccaccatttttggatggacgtattgttttcaccaagcagccagaacca
gttgttcctgtcaaggatcctacatcagaccttgcccaagttgctaggaagggatcatta
ttggtcagaaaacatcgggaacagaaagagagaaagaaagctcaacataaagactgggaa
ttagctggtactaagcttggtaacatcatgggcgtagagaaaaaagatgagaaggaagca
gaagatgtgaactataaatctcaacagcagtttgctgatcatatgaaagagaagacacaa
gcatcaagtgactttgcattaaagaagacattaaagcaacaacgagagtttctaccaatc
tatgctaccaggaatgagttattaaacgtcatcagagataacagcgttgttattattgta
ggagaaacaggatcagggaaaacaacacaactgactcagtacttacaggaagaaggctac
agtaactatggaatgattggctgtactcagcctcgtcgtgttgctgcaatgtctgtcgct
aaacgagtcagtgaagagatgggagtaacattaggtgaagaagtgggttatgcaatccga
tttgaagatgttacttgtgagaaaactgttataaagtacatgacggatggtatcttgttg
agggagtctttgcgtgaatctgacttggaccattacagtgcaattattatggatgaagct
catgaaagatcactcagtactgatgtcttatttggattattgagagaggtggttagcaga
cgacaggatatgaagctaatagtcacttcagctaccatggactccgagaaatttgcaaca
ttttttggcaatgttcctgtctttgagattcctggtagaacctttcctgtggatactcta
tacagtaagacagtggtagaggactatgtggatgcctcagtcaaacaagcaattcagatt
catcttcaaccaactccgggagatattcttgtcttcatgcctggtcaagaagacattgaa
gtcacgtgtgatgtcatagcagagagacttgatgaactcgacgatgcaccccagctggct
atattacccatctactctcaacttccctccgatcttcaagctaagatattccagaaggca
ccagatggtgttagaaagtgtgtagttgcaactaatattgctgaaacctcattgacagtg
gatggaatcatgtttgttgtggatgctggatattgtaaactcaaagtgtataatccaaga
attggtatggatgcactacaggtgtatccaattagtcaagctaatgctagacagagatca
ggtagagcaggaaggacaggtccagggcaatgttacagactctatacagagagagcatac
aaaaatgaactactaacaacaacagtaccagagattcagaggaccaatcttgccaatgta
gtattacttctgaaatcattaggagttcaagagttgttgcagttccactttatggatcca
ccccctcaggacaacatgttgaattccatgtatcagttatggatccttggagcattggat
aacacaggatccttgacgtcccttgggaggcagatggtagagttccctctagatccagct
ctatccaaaatgttaattgttgctgtagatatgggatgtagctcggaggtcttgactatt
gtttccatgttgtctattccatcaatcttctatcgaccaaaaggaagggaagaagaaagt
gaccaagctagagagaaatttgccgtcccagaaagtgaccatctgacgtatctcaatgtg
taccagcagtggaagaacaaccattattcctcatcatggggaaatgaacatttcattcat
gttaaagccatgcgtaaagttagagaagttcgccaacagttaaaggatattatggaccag
caaggactgaagcttatttcatctggcactggttgggatatcatacgaaagtgcatctgc
tcggcattctttcaccagggagcaaaattaaagggcattggggaatatgtgaacatccgt
actggtatgccatgtcatctacatccgactagtgccctctttggtatgggttttacaccg
gagtacattatctatcatgagctgattatgacatcaaaggaatacatgcagtgtgtaaca
gcagtagatggagaatggcttgccgagttaggtcctatgttttacagtgttaaggaagct
ggaaagtcaagacaggcaaatcgtcaagttgccaaggcaagtatgactgccatggaggaa
gagatgcagtcagcgacggaagaattgaaagccagacgagaatatgaggaggaacgaaga
cagagttcagttaaaaggttacaagtctccacaccaggacgactggaaggaaaaacacca
agctctgtaaggagaaaaacaccatcatcttttggtctttaa
DBGET
integrated database retrieval system
