Luidia clathrata (European starfish): 117289610
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Entry
117289610 CDS
T10152
Name
(RefSeq) ATP-dependent RNA helicase DDX1-like
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
arun Luidia clathrata (European starfish)
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arun03041
]
117289610
03016 Transfer RNA biogenesis [BR:
arun03016
]
117289610
Enzymes [BR:
arun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117289610
Spliceosome [BR:
arun03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
117289610
Transfer RNA biogenesis [BR:
arun03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
117289610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
117289610
NCBI-ProteinID:
XP_033626703
LinkDB
All DBs
Position
4:complement(4794608..4816802)
Genome browser
AA seq
738 aa
AA seq
DB search
MTAFAEFGVVPEIVQAVEEMDWLLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPV
IQIVQESLRSKSSGKMHGTIKAKADTPNWLMNSFDRGDSMAIDETGLLCQSREHNSWHGT
RSNKGVVNGGRYYYEATVTDEGLCRVGWSTAEASMNLGTDKLGFGFGGTGKKSFGRQFDT
YGEPFGIDDVIGCYLDLNNGTIEFAKNGVYLGLAFDIPKHILQTPLYAAVVLKNAEMKFN
FGATQFKYKPEGGYKPLCSASPECTAKSSNTGAQQAVAGKPQPNAPKAIILEPSRELAEQ
TLNQIKLFKKHIQTDCPRELLIIGGLPAKQQIEALQNGVDIVVATPGRIEDLISTGKLSL
NQVQFFILDEADGLLSAGYGQQITRMYDQIPKVTMDGKRLQMVVCSATLHSFEVKKLAEK
LMHFPTWVDLKGQDSVPETVHHVVVKVDPINDASWQRKGPKVQTDGVHKRDNIQYGSQNS
ETLSEGVKILKIDYLLKAIAEHKMDRGILFCRTKVDCDNAERYLASMGGGPNSSADHQFS
CVCLHGDRKPPERRENLQRFKDCQVRFLICTDVAARGIDVKGIPYVVNVTLPDEKENYVH
RIGRVGRADRMGLAISFVSTVPEKVWYHSCSSRGRGCTKTALKQQGGCCIWYNEMQYLGD
IEEHLGVVIDQTEPDMKVAANEFDGKVVYGQKKINTGSGYKGHVAILAPSVAELAELEQK
AQTSFLGFTGVQNTLFAA
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgactgcctttgcagagtttggtgtcgttccggagatagtgcaggctgtggaagaaatg
gactggctgctgccaacggatgtccaagcagaagccattccattgatccttgggggtggt
gacgtcttgatggcagctgagactggaagtggaaagactggggcgttctgtctgccagtc
attcagatcgttcaggaatcactgagatccaaatcctctgggaagatgcatggaactatc
aaagcaaaagcagatacccccaattggctgatgaactcgtttgacagaggcgattcaatg
gctatagatgaaactgggttactatgccagagcagggagcacaactcatggcacggcaca
cgctccaacaagggagttgtcaatggaggcaggtattactacgaggcaaccgttaccgac
gaaggactttgtcgtgttggatggtctactgctgaagcttccatgaatctaggcacagac
aagcttgggtttggcttcggaggaacagggaaaaagtcctttggtcggcagtttgacact
tacggtgagccatttggaattgatgatgtaattggatgctatttggatctcaacaatggg
accattgagttcgcaaaaaatggtgtttacttgggccttgcgtttgacattcccaaacac
attcttcagacaccgttgtacgctgctgtcgttcttaagaatgcagaaatgaagttcaac
tttggagccacacaattcaagtacaaacctgagggaggttacaaaccactgtgcagtgca
tccccagagtgtacggccaaatcatccaatacaggtgcccagcaagcggtagctggtaaa
cctcaacccaatgcacccaaggctatcatcctagaaccatcaagagagttagctgagcag
acactgaatcagattaagttgttcaagaaacatattcaaactgattgtccaagagagctg
ttgataattggaggtctaccagccaagcaacaaattgaggcacttcagaatggggtggat
atagtagtggctacccctgggagaattgaagacctcattagtactgggaaactctcactt
aatcaggtccagtttttcattctcgatgaagcggatgggctactgtcagctggttatggt
caacagataacccgtatgtacgaccagatacccaaggtcaccatggatggcaagaggcta
cagatggttgtttgctcagccacgctacattcatttgaagtcaagaaacttgccgagaaa
ttgatgcatttcccaacatgggtcgacttgaaggggcaagatagtgtgccagagactgtc
caccatgtcgttgtcaaagtagaccctattaatgatgcgtcatggcaacgcaaaggaccc
aaagtgcagactgatggagtgcacaaaagagacaacatacagtatggcagtcagaacagt
gagacgctttctgaaggggtcaagatcttaaagattgactacctcctcaaggccattgct
gagcacaagatggatcgaggcatcttattctgtcgcaccaaggtagattgtgacaatgca
gagagatacctagcatcgatgggaggcggtccaaacagttctgctgaccatcagttctcg
tgtgtctgtcttcatggtgacaggaagcccccagaacgtcgggagaaccttcaaagattc
aaggattgtcaggtacgcttcttgatttgcactgatgtagcggctagaggaattgacgtc
aaaggtatcccatatgttgtgaatgtcacgctccctgatgaaaaagagaactacgtccat
cggattggtcgtgtgggacgagctgacaggatgggccttgccatttcgtttgtgtccaca
gtaccggaaaaggtgtggtatcattcgtgttccagccgtggccgaggctgtacaaaaaca
gccttgaagcagcaaggaggatgctgtatatggtacaatgaaatgcagtacctgggcgac
atagaggagcaccttggggttgtgatcgatcagacagaaccagacatgaaagtggccgcc
aatgaattcgatggcaaagtagtgtacggacagaagaaaatcaatacagggagtggttac
aaaggtcatgtcgccatcttagccccgtctgtcgccgagctggctgaactggagcagaaa
gctcagacgtcatttcttgggttcaccggtgtccagaacacactatttgcagcatga
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