Luidia clathrata (European starfish): 117289661
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Entry
117289661 CDS
T10152
Name
(RefSeq) nuclear pore complex protein Nup93-like
KO
K14309
nuclear pore complex protein Nup93
Organism
arun Luidia clathrata (European starfish)
Pathway
arun03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
arun00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117289661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arun03019
]
117289661
Messenger RNA biogenesis [BR:
arun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117289661
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
ANAPC3
Motif
Other DBs
NCBI-GeneID:
117289661
NCBI-ProteinID:
XP_033626773
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All DBs
Position
4:3131101..3148097
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AA seq
828 aa
AA seq
DB search
MDTDGFGDLLRDAEQLTANVDSGAELPRVERNLHQIMESSQRLWTKTAQVGAPDAADVKA
SILLGSKGIDVPRISQRLETLSTTKTFEPLEPIADTDIQSFLRNERENAVLAVIQETKKN
TLQQTEKRFWETMQSEWQEERQKILNALISTGEDMIDIGPETESMLNETVGMEGRSAMDS
IEMAYARQVYLYNDKVVHGGIRPNLIHDFEQVSHQFDDKRVSELWAMVREMSSIPLISSR
DAIQTRCSQEMQMSLIRQARSYLETSYLTYIRTIVGENLQRAQVGGIPGTYHLVQGFLKV
KLLHPIPGLEDGEVDGQPVWPVIYYCLRCGSLDAVLHAVRRASQDLGQFEEYLRGYMEND
DRRLSPDMQTRLRISYRRSVRNSPDAYKRAVYCLIGYCDTADSHFEVATKTEDYLWIKLS
QVSFGEDSTGPIASDRLTLQQLQVLLLEEYGETHFSANQNPYLYFQVLFLCGQFEAAIEF
LSRSDVRLRCHAVHVAIALYEMGLLILPQNIQTQVLSKHVDDPAPIRRLNLARLISMYTS
KFENTDPREALQYFYILRGLKDSKGENLFIKCLSEMVIETREFDALLGRLGEDGTRRPGA
VDKFQVNTQQILETVAKDTEAKGLFEDAVKLYDLASNADKVLEILNRLLSPIVSMPKSPQ
SSRHRLHKLAVAIAERFQAQSITGNQSNTKSFHLLLDLMTYFDQYHSRDLDRALATIDTL
QLVPLTPDTVDDKVNAFKQYTDEVRRNMPDILVSTMNILHSKYRATRNSSLQNAQGLPAI
RSEDGGKESYLAHLRKQAKSLITFAGMLPYRMPGDTNARLVQMEVLMN
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggataccgatggatttggtgatctactgcgtgacgctgaacagctgaccgccaatgta
gatagtggagctgagttgccgcgggtggagcgtaatctacatcagattatggaatccagc
cagcgcttatggacaaagacggcacaagtaggggctcctgatgcagcagatgttaaagct
tcaattcttctaggatccaaagggattgatgttccaaggatttcacagagacttgaaacg
ctcagcaccaccaaaacatttgagccgctggagccaattgctgatacagatatacagagt
tttcttagaaatgagagagaaaatgctgtccttgcagtcattcaggagaccaagaaaaat
acattacagcagaccgagaagcgattctgggagaccatgcagtccgaatggcaggaggag
agacagaagattctgaacgctttgattagtaccggagaagacatgattgatattggacct
gagacggagtccatgttgaatgagaccgttggtatggagggccgaagtgccatggatagc
attgagatggcctatgcacgacaggtgtatttgtataatgacaaggtcgtacatggagga
atccgacccaatctcatccatgattttgagcaagtcagccatcagtttgatgacaagcgt
gtgagtgaactttgggcaatggtgcgtgagatgtcatcaattccgctaatatcatcaaga
gatgcaatccagacaagatgctcacaagaaatgcagatgtcgttgattcgtcaagctcga
tcttaccttgagaccagctacttgacttacattcgtacgatcgttggtgagaatctccag
cgagctcaagttggtggaatcccaggaacgtatcacttggtccaagggtttctcaaagtg
aagttacttcatcctataccaggattagaggacggtgaagttgatggacagcctgtatgg
ccagtcatttactactgtcttcgctgtgggagtctggatgccgtactgcatgccgtccga
agagcctctcaagatctcgggcagtttgaagaatacctgagaggctacatggaaaatgat
gacagaaggctgtctccagacatgcagacaagactacgtatcagttacagacgatctgtg
agaaacagcccagatgcatacaaaagagctgtttactgcctgattggatattgtgacacg
gcagacagtcattttgaagttgctacaaagacagaggattacctgtggatcaagctaagt
caagtgagttttggagaggactcaaccggtcctatcgcctcagatcgtctgactctacag
caacttcaagtccttcttcttgaggagtacggcgagactcatttcagcgcaaaccagaac
ccatatctctacttccaggttctgtttctatgtggccagtttgaggccgctatcgagttc
ttatcgcgctctgatgtcaggttacgctgtcatgccgtacacgttgctattgcgttgtat
gagatgggattgctgattctaccacagaacattcagacgcaagttttgagtaaacatgta
gatgatccagctcctattcgaagactcaatttagctcgtctgatcagcatgtatacatct
aagtttgagaacactgaccctagagaagctctacagtatttctacattctcagaggattg
aaggattctaaaggtgagaatctgttcataaaatgcctgagtgagatggtaatagagacc
agagagtttgatgccctcctcggtcgtctcggggaggacggaaccagacgaccaggagct
gtggataaattccaagtcaacactcagcagatcttggaaacggtcgccaaagacaccgag
gcaaagggtttatttgaagacgctgtgaagctgtatgatcttgcaagtaatgctgataag
gtgttagagattttgaatcgtctgctgagtccgattgtgtcaatgcctaagagtccacag
tcttctagacacagattacataaactagcagtggctattgctgaaagattccaggcgcag
tcaatcacaggcaaccaatccaacaccaagtcatttcatcttctcttggacctaatgacg
tactttgatcagtatcatagcagagatctagatagggctctggcgacgattgacactcta
cagctggtacctctcactccagacacagtggatgacaaagtcaatgccttcaaacaatac
acagatgaggttagaagaaatatgccagacattttggtatccacaatgaacatcttacat
tccaagtatagagcgacacgaaacagcagtctgcagaatgctcagggtctgcctgccatc
agatcagaggatggtggaaaggaatcatacctagctcacctgaggaaacaagcgaaatct
ctgatcacatttgccggaatgcttccatatcgaatgccaggggatacgaacgcaaggctt
gtacagatggaagtacttatgaactga
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